RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	WT1-AS	Q06250	92 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	OR5I1	Q13606	314 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	JOSD1	Q15040	202 aa	Predicted RBP	3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	RTL8B	Q17RB0	113 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	PATE2	Q6UY27	113 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	C19orf35	Q6ZS72	473 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	FAM223A	Q8IWN6	122 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	TMEM256	Q8N2U0	113 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	OR1L8	Q8NGR8	309 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	TMEM167A	Q8TBQ9	72 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	SFRP2	Q96HF1	295 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	PACRG	Q96M98	296 aa	Predicted RBP	3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	KRTAP4-12	Q9BQ66	201 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	SLC25A2	Q9BXI2	301 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	RAB9B	Q9NP90	201 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	ENY2	Q9NPA8	101 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772		V9GYV3	84 aa		3.18	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF320	A2RRD8	509 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772		C9JCJ5	164 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	PPP5D1	E7EU14	171 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772		F2Z2F3	143 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	APOA2	P02652	100 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	CRYBB3	P26998	211 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	GPX4	P36969	197 aa	Predicted RBP	3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	YPEL3	P61236	119 aa	Predicted RBP	3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	RPL8	P62917	257 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	PSG5	Q15238	335 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	CENPW	Q5EE01	88 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	REG3G	Q6UW15	175 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	THAP8	Q8NA92	274 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	OSR1	Q8TAX0	266 aa	Predicted RBP	3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	ACY3	Q96HD9	319 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	C14orf144	Q96I85	54 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	SLC35E1	Q96K37	410 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	IGF2BP2-AS1	Q96M15	143 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	HARBI1	Q96MB7	349 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	IMMP2L	Q96T52	175 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	PFDN5	Q99471	154 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	TXNDC17	Q9BRA2	123 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	IL36B	Q9NZH7	164 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	MSRB1	Q9NZV6	116 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	TRAPPC1	Q9Y5R8	145 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	LY96	Q9Y6Y9	160 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772		S4R3C0	116 aa		3.17	□□□□□ -1.9
MSI2-216	ENST00000582772	TRBV9	A0A0B4J1U6	114 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	IGLC7	A0M8Q6	106 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	GRIFIN	A4D1Z8	144 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	FCN1	O00602	326 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	GCG	P01275	180 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	OR10J4	P0C629	311 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	PYY	P10082	97 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	CNN1	P51911	297 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	ATP5I	P56385	69 aa	Predicted RBP	3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	RAB4B	P61018	213 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	DAD1	P61803	113 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	PKIA	P61925	76 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	SELENOT	P62341	195 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	CNBP	P62633	177 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	SUMO1	P63165	101 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF90	Q03938	601 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	RAB31	Q13636	194 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	FXYD3	Q14802	87 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	KRTAP19-2	Q3LHN2	52 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	TDRG1	Q3Y452	100 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	FAM106A	Q4KMX7	169 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	FAM71F2	Q6NXP2	309 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	KCNIP4	Q6PIL6	250 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	PQLC2	Q6ZP29	291 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	PDPN	Q86YL7	162 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF664	Q8N3J9	261 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	NPIPB3	Q92617	1050 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	LINC00479	Q96M42	142 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	UHRF2	Q96PU4	802 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	RNASE7	Q9H1E1	156 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	LINC00846	Q9NV44	126 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	FKBP11	Q9NYL4	201 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	WASHC3	Q9Y3C0	194 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	ARL2-SNX15	V9GYD0	113 aa		3.16	□□□□□ -1.9
MSI2-216	ENST00000582772	TRAV9-1	A0A075B6T8	112 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	IGHV3-21	A0A0B4J1V1	117 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	TRAV34	A0A0B4J273	112 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772		A0A1W2PRE2	83 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	HELT	A6NFD8	242 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	TEX22	C9J3V5	150 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	GATC	O43716	136 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	OR7C2	O60412	319 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	MT-CO2	P00403	227 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	SNRPC	P09234	159 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	CRYGA	P11844	174 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	DDT	P30046	118 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	LGALS7	P47929	136 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	GNG4	P50150	75 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	TCL1A	P56279	114 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	GNG5	P63218	68 aa		3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	ERH	P84090	104 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-216	ENST00000582772	GDF5OS	Q5U4N7	250 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms