RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MRPS16Q9Y3D3 137 aaKnown RBP5.25□□□□□ -1.57
CCDC47-205ENST00000582331 TRAV26-1A0A087WT03 109 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 PLAC8L1A1L4L8 177 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 B4DEV8 164 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 ISLRO14498 428 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 SOCS3O14543 225 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 INSP01308 110 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 PSG1P11464 419 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 AZU1P20160 251 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 FLI1Q01543 452 aaPredicted RBP5.24□□□□□ -1.57
CCDC47-205ENST00000582331 PNRC1Q12796 327 aaPredicted RBP5.24□□□□□ -1.57
CCDC47-205ENST00000582331 OR5I1Q13606 314 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 TMEM241Q24JQ0 296 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 AMTNQ6UX39 209 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 MIR17HGQ75NE6 70 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 TMEM37Q8WXS4 190 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 NPIPB3Q92617 1050 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 ACY3Q96HD9 319 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 SMIM7Q9BQ49 75 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 TXNDC17Q9BRA2 123 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 PARLQ9H300 379 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 DOK5Q9P104 306 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 NAT8Q9UHE5 227 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 FUT9Q9Y231 359 aa5.24□□□□□ -1.57
CCDC47-205ENST00000582331 A8MTW9 85 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
CCDC47-205ENST00000582331 F6UZH7 168 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 PDE6DO43924 150 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 DUSP14O95147 198 aaKnown RBP5.23□□□□□ -1.57
CCDC47-205ENST00000582331 RAB5AP20339 215 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 GCSHP23434 173 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 UBE2G2P60604 165 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 RPL23P62829 140 aaKnown RBP5.23□□□□□ -1.57
CCDC47-205ENST00000582331 SPINK13Q1W4C9 94 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 SAMD13Q5VXD3 122 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 ETFRF1Q6IPR1 90 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 PATE2Q6UY27 113 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 IQCF2Q8IXL9 164 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 C11orf52Q96A22 123 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 RPUSD4Q96CM3 377 aaKnown RBP5.23□□□□□ -1.57
CCDC47-205ENST00000582331 RNF125Q96EQ8 232 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 FAM167A-AS1Q96KT0 104 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 LINC01587Q99440 93 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 TRGV9Q99603 122 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 TIMM8BQ9Y5J9 83 aaPredicted RBP5.23□□□□□ -1.57
CCDC47-205ENST00000582331 ARL2-SNX15V9GYD0 113 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
CCDC47-205ENST00000582331 A0A087WTM6 91 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 A0A0J9YY99 117 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 M0R2Z0 102 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 CRXO43186 299 aaPredicted RBP5.22□□□□□ -1.57
CCDC47-205ENST00000582331 SELENOTP62341 195 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 ZNF90Q03938 601 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 ELOBQ15370 118 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 MORN5Q5VZ52 161 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 CST9LP1Q5W188 147 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 OR10J6PQ8NGY7 276 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 C16orf92Q96LL3 132 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 SLC25A2Q9BXI2 301 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 MRPL32Q9BYC8 188 aaKnown RBP5.22□□□□□ -1.57
CCDC47-205ENST00000582331 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 CTDSP1Q9GZU7 261 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 DNAJC4Q9NNZ3 241 aa5.22□□□□□ -1.57
CCDC47-205ENST00000582331 TRBV20OR9-2A0A075B6H5 130 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TRAV5A0A0B4J249 113 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 H3BNG1 76 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 SIVA1O15304 175 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 NDUFB4O95168 129 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 PFN1P07737 140 aaKnown RBP5.21□□□□□ -1.58
CCDC47-205ENST00000582331 CXCL1P09341 107 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 HTN1P15515 57 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 MEOX2P50222 304 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TAS2R60P59551 318 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 PLP1P60201 277 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 HAMPP81172 84 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 ADIRFQ15847 76 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 PQLC2Q6ZP29 291 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 NFE4Q86UQ8 179 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 OR8I2Q8N0Y5 310 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TMEM256Q8N2U0 113 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 OR1L4Q8NGR5 311 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 C16orf74Q96GX8 76 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 PYGO2Q9BRQ0 406 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 DERL1Q9BUN8 251 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 NOP10Q9NPE3 64 aaKnown RBP5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TMEM167BQ9NRX6 74 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TNFRSF18Q9Y5U5 241 aa5.21□□□□□ -1.58
CCDC47-205ENST00000582331 TRAV12-2A0A075B6T6 113 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 TGIF2-C20orf24A0A0A6YYL0 155 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 A0A1W2PRE2 83 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 C1orf196B1AJZ1 125 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 DNAH10OSP0CZ25 163 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 TAS2R45P59539 299 aa5.2□□□□□ -1.58
CCDC47-205ENST00000582331 RAB5BP61020 215 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms