RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CHAC1Q9BUX1 264 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 NPCDR1Q9BY65 106 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 GTSF1LQ9H1H1 148 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 LYRM2Q9NU23 88 aaPredicted RBP6.55□□□□□ -1.36
RFFL-208ENST00000581039 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 TRBV6-4A0A1B0GX49 114 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 CIDEAO60543 219 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
RFFL-208ENST00000581039 S100A10P60903 97 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 RHOHQ15669 191 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 ACOT6Q3I5F7 207 aaPredicted RBP6.54□□□□□ -1.36
RFFL-208ENST00000581039 TOR2AQ5JU69 321 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 Q8N976 141 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 ATP6V0E2Q8NHE4 81 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 BAALCQ8WXS3 180 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 C2orf50Q96LR7 162 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 ATP5SQ99766 215 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
RFFL-208ENST00000581039 TRAV21A0A0B4J279 112 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 DIRC3C9JPN6 131 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 OR7C2O60412 319 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 TYMSP04818 313 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 THAP6Q8TBB0 222 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 TMED6Q8WW62 240 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 SDF2L1Q9HCN8 221 aa6.53□□□□□ -1.36
RFFL-208ENST00000581039 IGHV3-73A0A0B4J1V6 119 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 GGTLC3B5MD39 225 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 RS1O15537 224 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 BTCP35070 178 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 CFAP126Q5VTH2 177 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 RMI2Q96E14 147 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
RFFL-208ENST00000581039 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 RNF222A6NCQ9 220 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 UBE2L3P68036 154 aaKnown RBP6.51□□□□□ -1.37
RFFL-208ENST00000581039 RAB32Q13637 225 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 DAZ4Q86SG3 579 aaKnown RBP6.51□□□□□ -1.37
RFFL-208ENST00000581039 Q8N3U1 123 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 ASB13Q8WXK3 278 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 NMES1Q9C002 83 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 DAZ3Q9NR90 486 aaKnown RBP6.51□□□□□ -1.37
RFFL-208ENST00000581039 KCNIP2Q9NS61 270 aa6.51□□□□□ -1.37
RFFL-208ENST00000581039 TRAV8-1A0A0A6YYK1 113 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 CCDC160A6NGH7 325 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 MGST1P10620 155 aaKnown RBP6.5□□□□□ -1.37
RFFL-208ENST00000581039 NHLH2Q02577 135 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 FAM74A1Q5RGS3 127 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 OR5C1Q8NGR4 320 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 TREM1Q9NP99 234 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
RFFL-208ENST00000581039 IGKV2D-24A0A075B6R9 120 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 TRAV6A0A075B6T7 132 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 PGPA6NDG6 321 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 C17orf112F2Z3M2 114 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 F6UZH7 168 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 SEC11BP0C7V7 166 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
RFFL-208ENST00000581039 IL15RAQ13261 267 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 DPPA3Q6W0C5 159 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 SEC22CQ9BRL7 303 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 OTORQ9NRC9 128 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 URGCP-MRPS24S4R325 110 aa6.49□□□□□ -1.37
RFFL-208ENST00000581039 A0A087WWC5 75 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GAGE12JA6NER3 117 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 IGLV2-11P01706 119 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 TCRBP04435 133 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 TAS2R45P59539 299 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GAGE1Q13065 139 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GAGE4Q13068 117 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GAGE5Q13069 117 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 KHDC3LQ587J8 217 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 GOLT1AQ6ZVE7 132 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 TVP23CQ96ET8 276 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 SDHCQ99643 169 aaPredicted RBP6.48□□□□□ -1.37
RFFL-208ENST00000581039 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
RFFL-208ENST00000581039 MBD2Q9UBB5 411 aa6.48□□□□□ -1.37
RFFL-208ENST00000581039 PGPEP1LA6NFU8 196 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 TAAR5O14804 337 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 IL7P13232 177 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 ZNF506Q5JVG8 444 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 CYB561D1Q8N8Q1 229 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 PTH2Q96A98 100 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
RFFL-208ENST00000581039 PLA2G10O15496 165 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 LYRM1O43325 122 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 FGF8P55075 233 aaPredicted RBP6.46□□□□□ -1.38
RFFL-208ENST00000581039 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 FFAR4Q5NUL3 377 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 ZFP2Q6ZN57 461 aa6.46□□□□□ -1.38
RFFL-208ENST00000581039 ARL6IP6Q8N6S5 226 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms