RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 SETD2Q9BYW2 2564 aaPredicted RBP11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 DPM2O94777 84 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 IGLC6P0CF74 106 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 OR1N2Q8NGR9 330 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 CSTL1Q9H114 145 aa11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
CUEDC1-206ENST00000577830 M0R1W7 72 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 RNASE4P34096 147 aaKnown RBP11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 U3KQK5 164 aa11.33□□□□□ -0.6
CUEDC1-206ENST00000577830 ODF3BA8MYP8 253 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 K7EP34 96 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 PAX2Q02962 417 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 ADAMTSL5Q6ZMM2 481 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 ATP5G2Q06055 141 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 EEF1AKMT3Q96AZ1 226 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 F5H697 171 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 MAPKAPK5-AS1Q8N8E1 139 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
CUEDC1-206ENST00000577830 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 PPBPP02775 128 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 TGFAP01135 160 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 LAGE3Q14657 143 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 SCGB3A1Q96QR1 104 aa11.31□□□□□ -0.6
CUEDC1-206ENST00000577830 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 CRYBA4P53673 196 aa11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 ITPR1Q14643 2758 aa11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 PRR9Q5T870 116 aa11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
CUEDC1-206ENST00000577830 UCNP55089 124 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 SIVA1O15304 175 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 GNRH2O43555 120 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 HTN1P15515 57 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 ZFHX3Q15911 3703 aa11.29□□□□□ -0.6
CUEDC1-206ENST00000577830 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 H3BMG7 143 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 PAX8Q06710 450 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 Q8N8P6 123 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 GTSF1LQ9H1H1 148 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 HHLA3Q9XRX5 114 aa11.28□□□□□ -0.6
CUEDC1-206ENST00000577830 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.6
CUEDC1-206ENST00000577830 CD300EQ496F6 205 aaPredicted RBP11.27□□□□□ -0.6
CUEDC1-206ENST00000577830 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.6
CUEDC1-206ENST00000577830 VCX2Q9H322 139 aa11.27□□□□□ -0.6
CUEDC1-206ENST00000577830 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 ATP5LO75964 103 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 SPXQ9BT56 116 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 SRSF1Q07955 248 aaKnown RBP eCLIP11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 SRSF9Q13242 221 aaKnown RBP eCLIP11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
CUEDC1-206ENST00000577830 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 MINOS1Q5TGZ0 78 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 DPF1Q92782 380 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 MINOS1-NBL1R4GNA1 71 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 A0A087WWL8 130 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 WFDC2Q14508 124 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 NPFFO15130 113 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
CUEDC1-206ENST00000577830 WNK1Q9H4A3 2382 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 APOMO95445 188 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 NPFFR1Q9GZQ6 430 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 Q8N6K4 173 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 JPT2Q9H910 190 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 SS18L2Q9UHA2 77 aa11.25□□□□□ -0.61
CUEDC1-206ENST00000577830 UFSP1Q6NVU6 142 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms