RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
RPAIN-217ENST00000575711 TIMM8BQ9Y5J9 83 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-217ENST00000575711 TGP01266 2768 aa10.02□□□□□ -0.81
RPAIN-217ENST00000575711 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 LCE2BO14633 110 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 SH2D1AO60880 128 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 SRP19P09132 144 aaKnown RBP10.01□□□□□ -0.81
RPAIN-217ENST00000575711 CRIP1P50238 77 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 GSN-AS1Q9NRJ2 163 aa10.01□□□□□ -0.81
RPAIN-217ENST00000575711 LYRM9A8MSI8 78 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 ORM1P02763 201 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 TYMSP04818 313 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
RPAIN-217ENST00000575711 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
RPAIN-217ENST00000575711 PRR27Q6MZM9 219 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 MUC7Q8TAX7 377 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 NOP10Q9NPE3 64 aaKnown RBP10□□□□□ -0.81
RPAIN-217ENST00000575711 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
RPAIN-217ENST00000575711 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
RPAIN-217ENST00000575711 C9JCJ5 164 aa9.99□□□□□ -0.81
RPAIN-217ENST00000575711 GNRH2O43555 120 aa9.99□□□□□ -0.81
RPAIN-217ENST00000575711 TCL1AP56279 114 aa9.99□□□□□ -0.81
RPAIN-217ENST00000575711 BIN3Q9NQY0 253 aa9.99□□□□□ -0.81
RPAIN-217ENST00000575711 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 B4DEV8 164 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 IGLV2-8P01709 118 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
RPAIN-217ENST00000575711 DAZ2Q13117 558 aaKnown RBP9.98□□□□□ -0.81
RPAIN-217ENST00000575711 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 MDFICQ9P1T7 246 aa9.98□□□□□ -0.81
RPAIN-217ENST00000575711 ZNF727A8MUV8 499 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 M0R036 132 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 DAD1P61803 113 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
RPAIN-217ENST00000575711 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
RPAIN-217ENST00000575711 KRBOX1C9JBD0 128 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 C9JQL5 133 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 DEFB130BP0DP73 79 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 DEFB130AP0DP74 79 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 S100A4P26447 101 aaKnown RBP9.96□□□□□ -0.82
RPAIN-217ENST00000575711 ASIPP42127 132 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 OR5I1Q13606 314 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 FAM74A3Q4VXF1 159 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 Q6ZTC4 211 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 SPXQ9BT56 116 aa9.96□□□□□ -0.82
RPAIN-217ENST00000575711 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 SPINK4O60575 86 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 GAGE7O76087 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 GAGE12FP0CL80 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 GAGE12GP0CL81 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 GAGE12IP0CL82 117 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 LGALS9BQ3B8N2 356 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-217ENST00000575711 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
RPAIN-217ENST00000575711 TRAV10A0A0B4J240 114 aa9.94□□□□□ -0.82
RPAIN-217ENST00000575711 SOHLH1Q5JUK2 328 aa9.94□□□□□ -0.82
RPAIN-217ENST00000575711 ZFAND6Q6FIF0 208 aa9.94□□□□□ -0.82
RPAIN-217ENST00000575711 Q6ZTI0 123 aa9.94□□□□□ -0.82
RPAIN-217ENST00000575711 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
RPAIN-217ENST00000575711 MRPL16Q9NX20 251 aaKnown RBP9.94□□□□□ -0.82
RPAIN-217ENST00000575711 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 GRIFINA4D1Z8 144 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 K7EN84 100 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 M0R2P5 195 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 P01737 135 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
RPAIN-217ENST00000575711 RPL19P84098 196 aaKnown RBP9.93□□□□□ -0.82
RPAIN-217ENST00000575711 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
RPAIN-217ENST00000575711 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 H3BVH4 76 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 ATP5G1P05496 136 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 CXCL1P09341 107 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 RPS20P60866 119 aaKnown RBP9.92□□□□□ -0.82
RPAIN-217ENST00000575711 TMEM241Q24JQ0 296 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 DNLZQ5SXM8 178 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-217ENST00000575711 LINC01551Q86U37 167 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 OR2D3Q8NGH3 330 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 IL36BQ9NZH7 164 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
RPAIN-217ENST00000575711 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 XKRY2A2RUG3 117 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 SFTA3P0C7M3 94 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 ARMS2P0C7Q2 107 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 HTN3P15516 51 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 UQCC3Q6UW78 93 aa9.91□□□□□ -0.82
RPAIN-217ENST00000575711 COMMD7Q86VX2 200 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms