RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SLAQ13239 276 aa13.56□□□□□ -0.24
SCARF1-208ENST00000574545 IQCF2Q8IXL9 164 aa13.56□□□□□ -0.24
SCARF1-208ENST00000574545 HHLA3Q9XRX5 114 aa13.56□□□□□ -0.24
SCARF1-208ENST00000574545 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
SCARF1-208ENST00000574545 TYMSP04818 313 aa13.55□□□□□ -0.24
SCARF1-208ENST00000574545 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-208ENST00000574545 ZNF479Q96JC4 524 aa13.55□□□□□ -0.24
SCARF1-208ENST00000574545 C11orf21Q9P2W6 132 aa13.55□□□□□ -0.24
SCARF1-208ENST00000574545 PSG8Q9UQ74 426 aa13.55□□□□□ -0.24
SCARF1-208ENST00000574545 HSPG2P98160 4391 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 CTXND1A0A1B0GTU2 59 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 TAAR5O14804 337 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 SFTA3P0C7M3 94 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 TNP2Q05952 138 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 C8orf49Q96NF6 230 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 NAGKQ9UJ70 344 aa13.54□□□□□ -0.24
SCARF1-208ENST00000574545 ARPC5O15511 151 aa13.53□□□□□ -0.24
SCARF1-208ENST00000574545 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
SCARF1-208ENST00000574545 KCNS1Q96KK3 526 aa13.53□□□□□ -0.24
SCARF1-208ENST00000574545 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
SCARF1-208ENST00000574545 APOBP04114 4563 aaKnown RBP13.53□□□□□ -0.24
SCARF1-208ENST00000574545 A0A1W2PPQ1 181 aa13.52□□□□□ -0.25
SCARF1-208ENST00000574545 SMLR1H3BR10 107 aa13.52□□□□□ -0.25
SCARF1-208ENST00000574545 M0R2P5 195 aa13.52□□□□□ -0.25
SCARF1-208ENST00000574545 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.25
SCARF1-208ENST00000574545 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
SCARF1-208ENST00000574545 NDFIP1Q9BT67 221 aa13.52□□□□□ -0.25
SCARF1-208ENST00000574545 K7EQM0 130 aa13.51□□□□□ -0.25
SCARF1-208ENST00000574545 SDF2L1Q9HCN8 221 aa13.51□□□□□ -0.25
SCARF1-208ENST00000574545 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
SCARF1-208ENST00000574545 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
SCARF1-208ENST00000574545 GCGP01275 180 aa13.5□□□□□ -0.25
SCARF1-208ENST00000574545 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
SCARF1-208ENST00000574545 TTC32Q5I0X7 151 aa13.5□□□□□ -0.25
SCARF1-208ENST00000574545 LYPD5Q6UWN5 251 aa13.5□□□□□ -0.25
SCARF1-208ENST00000574545 LINC00479Q96M42 142 aa13.5□□□□□ -0.25
SCARF1-208ENST00000574545 TRGV4A0A0C4DH28 118 aa13.49□□□□□ -0.25
SCARF1-208ENST00000574545 PFN1P07737 140 aaKnown RBP13.49□□□□□ -0.25
SCARF1-208ENST00000574545 MED14OSP0DP75 135 aa13.49□□□□□ -0.25
SCARF1-208ENST00000574545 FGF8P55075 233 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-208ENST00000574545 AKR1C8PQ5T2L2 129 aa13.49□□□□□ -0.25
SCARF1-208ENST00000574545 PRNTQ86SH4 94 aa13.49□□□□□ -0.25
SCARF1-208ENST00000574545 FAM74A7A6NL05 159 aa13.48□□□□□ -0.25
SCARF1-208ENST00000574545 K7EQD1 137 aa13.48□□□□□ -0.25
SCARF1-208ENST00000574545 BTF3P20290 206 aaKnown RBP13.48□□□□□ -0.25
SCARF1-208ENST00000574545 SMUG1Q53HV7 270 aa13.48□□□□□ -0.25
SCARF1-208ENST00000574545 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
SCARF1-208ENST00000574545 OR11H4Q8NGC9 324 aa13.48□□□□□ -0.25
SCARF1-208ENST00000574545 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 SIVA1O15304 175 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 ZNF345Q14585 488 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 SAPCD1Q5SSQ6 148 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 NEGR1Q7Z3B1 354 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 OR4C5Q8NGB2 326 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 C9orf85Q96MD7 179 aa13.47□□□□□ -0.25
SCARF1-208ENST00000574545 HMSDA8MTL9 139 aa13.46□□□□□ -0.25
SCARF1-208ENST00000574545 NXPH4O95158 308 aa13.46□□□□□ -0.25
SCARF1-208ENST00000574545 UBE2G2P60604 165 aa13.46□□□□□ -0.25
SCARF1-208ENST00000574545 DPPA3Q6W0C5 159 aa13.46□□□□□ -0.25
SCARF1-208ENST00000574545 NKX6-2Q9C056 277 aaPredicted RBP13.46□□□□□ -0.25
SCARF1-208ENST00000574545 MAP1LC3B2A6NCE7 125 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 PEX7O00628 323 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 RNASE3P12724 160 aaKnown RBP13.45□□□□□ -0.26
SCARF1-208ENST00000574545 GYPEP15421 78 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 PTH2Q96A98 100 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 MAP1LC3BQ9GZQ8 125 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 ARL2-SNX15V9GYD0 113 aa13.45□□□□□ -0.26
SCARF1-208ENST00000574545 IGKV3D-20A0A0C4DH25 116 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 RS1O15537 224 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 IFNA7P01567 189 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 ORM1P02763 201 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 GATA1P15976 413 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-208ENST00000574545 FHITP49789 147 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 ZNF876PQ49A33 203 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 ZFP69Q49AA0 526 aa13.44□□□□□ -0.26
SCARF1-208ENST00000574545 SRIP30626 198 aa13.43□□□□□ -0.26
SCARF1-208ENST00000574545 CFAP126Q5VTH2 177 aa13.43□□□□□ -0.26
SCARF1-208ENST00000574545 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
SCARF1-208ENST00000574545 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
SCARF1-208ENST00000574545 PCLOQ9Y6V0 5065 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 LOC100131303A0A0U1RQF7 123 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 C9JCJ5 164 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 SEC11BP0C7V7 166 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 CRIP1P50238 77 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 LINC00315P59091 139 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 Q86TA4 180 aa13.42□□□□□ -0.26
SCARF1-208ENST00000574545 FABP5P3A8MUU1 101 aa13.41□□□□□ -0.26
SCARF1-208ENST00000574545 CIDEAO60543 219 aa13.41□□□□□ -0.26
SCARF1-208ENST00000574545 PPT1P50897 306 aa13.41□□□□□ -0.26
SCARF1-208ENST00000574545 MBD3L1Q8WWY6 194 aa13.41□□□□□ -0.26
SCARF1-208ENST00000574545 KRTAP17-1Q9BYP8 105 aa13.41□□□□□ -0.26
SCARF1-208ENST00000574545 A0A0D9SG52 128 aa13.4□□□□□ -0.26
SCARF1-208ENST00000574545 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
SCARF1-208ENST00000574545 PCNPQ8WW12 178 aaKnown RBP13.4□□□□□ -0.26
SCARF1-208ENST00000574545 TRBV6-1A0A0K0K1D8 114 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 BCL2L11O43521 198 aa13.39□□□□□ -0.27
SCARF1-208ENST00000574545 SLC25A29Q8N8R3 303 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms