RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CELA1Q9UNI1 258 aa11.24□□□□□ -0.61
CCNE1-204ENST00000574121 C9JCJ5 164 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 CRIP1P50238 77 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 TCL1AP56279 114 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 ZNF415Q09FC8 603 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 PEA15Q15121 130 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 PARLQ9H300 379 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 BIN3Q9NQY0 253 aa11.23□□□□□ -0.61
CCNE1-204ENST00000574121 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 C3orf84H3BNL1 204 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 SH2D1AO60880 128 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 NOP10Q9NPE3 64 aaKnown RBP11.22□□□□□ -0.61
CCNE1-204ENST00000574121 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
CCNE1-204ENST00000574121 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
CCNE1-204ENST00000574121 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
CCNE1-204ENST00000574121 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
CCNE1-204ENST00000574121 SPXQ9BT56 116 aa11.21□□□□□ -0.61
CCNE1-204ENST00000574121 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 ORM1P02763 201 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 TYMSP04818 313 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 SRP19P09132 144 aaKnown RBP11.2□□□□□ -0.62
CCNE1-204ENST00000574121 DAD1P61803 113 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 LGALS9BQ3B8N2 356 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 LY96Q9Y6Y9 160 aa11.2□□□□□ -0.62
CCNE1-204ENST00000574121 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
CCNE1-204ENST00000574121 B4DEV8 164 aa11.19□□□□□ -0.62
CCNE1-204ENST00000574121 GNRH2O43555 120 aa11.19□□□□□ -0.62
CCNE1-204ENST00000574121 SMIM7Q9BQ49 75 aa11.19□□□□□ -0.62
CCNE1-204ENST00000574121 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
CCNE1-204ENST00000574121 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
CCNE1-204ENST00000574121 CEBPGP53567 150 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 Q6ZTC4 211 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
CCNE1-204ENST00000574121 C18orf15Q96N68 181 aa11.18□□□□□ -0.62
CCNE1-204ENST00000574121 TRAV10A0A0B4J240 114 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 SPINK4O60575 86 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 CXCL1P09341 107 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 ASIPP42127 132 aa11.17□□□□□ -0.62
CCNE1-204ENST00000574121 DAZAP1Q96EP5 407 aaKnown RBP11.17□□□□□ -0.62
CCNE1-204ENST00000574121 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 ZNF727A8MUV8 499 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 M0R036 132 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 M0R2P5 195 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
CCNE1-204ENST00000574121 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
CCNE1-204ENST00000574121 CEMP1Q6PRD7 247 aaPredicted RBP11.16□□□□□ -0.62
CCNE1-204ENST00000574121 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 RASL10AQ92737 203 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
CCNE1-204ENST00000574121 TRGV1A0A0A0MS02 117 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 C9JQL5 133 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 ATP5G1P05496 136 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
CCNE1-204ENST00000574121 OR5I1Q13606 314 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 CASC10Q5T4H9 136 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 Q6ZTI0 123 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 PTH2Q96A98 100 aa11.15□□□□□ -0.62
CCNE1-204ENST00000574121 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
CCNE1-204ENST00000574121 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 GAGE7O76087 117 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
CCNE1-204ENST00000574121 TRGV2A0A075B6R0 118 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 K7EN84 100 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 P01737 135 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 MED14OSP0DP75 135 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
CCNE1-204ENST00000574121 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 LINC01551Q86U37 167 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
CCNE1-204ENST00000574121 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
CCNE1-204ENST00000574121 TCTAP57738 103 aa11.12□□□□□ -0.63
CCNE1-204ENST00000574121 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
CCNE1-204ENST00000574121 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
CCNE1-204ENST00000574121 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
CCNE1-204ENST00000574121 ZNF575Q86XF7 245 aa11.12□□□□□ -0.63
CCNE1-204ENST00000574121 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 ARMS2P0C7Q2 107 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
CCNE1-204ENST00000574121 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms