RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 MED14OSP0DP75 135 aa17.92■□□□□ 0.46
NPLOC4-215ENST00000574095 IGHV3-16A0A0C4DH30 117 aa17.91■□□□□ 0.46
NPLOC4-215ENST00000574095 SERTM2A0A1B0GWG4 89 aa17.91■□□□□ 0.46
NPLOC4-215ENST00000574095 TYMSP04818 313 aa17.91■□□□□ 0.46
NPLOC4-215ENST00000574095 IQCF2Q8IXL9 164 aa17.91■□□□□ 0.46
NPLOC4-215ENST00000574095 NDFIP1Q9BT67 221 aa17.91■□□□□ 0.46
NPLOC4-215ENST00000574095 G3V3Q6 166 aa17.9■□□□□ 0.46
NPLOC4-215ENST00000574095 EPDR1Q9UM22 224 aa17.9■□□□□ 0.46
NPLOC4-215ENST00000574095 PSG8Q9UQ74 426 aa17.9■□□□□ 0.46
NPLOC4-215ENST00000574095 GGTLC3B5MD39 225 aa17.89■□□□□ 0.45
NPLOC4-215ENST00000574095 K7EQM0 130 aa17.89■□□□□ 0.45
NPLOC4-215ENST00000574095 ZNF80P51504 273 aaPredicted RBP17.89■□□□□ 0.45
NPLOC4-215ENST00000574095 ZNF726P1Q15940 193 aa17.89■□□□□ 0.45
NPLOC4-215ENST00000574095 SDF2L1Q9HCN8 221 aa17.89■□□□□ 0.45
NPLOC4-215ENST00000574095 A0A1W2PPQ1 181 aa17.88■□□□□ 0.45
NPLOC4-215ENST00000574095 M0R2P5 195 aa17.88■□□□□ 0.45
NPLOC4-215ENST00000574095 MRPL23Q16540 153 aaKnown RBP17.88■□□□□ 0.45
NPLOC4-215ENST00000574095 KCNS1Q96KK3 526 aa17.88■□□□□ 0.45
NPLOC4-215ENST00000574095 IGLV2-11P01706 119 aa17.87■□□□□ 0.45
NPLOC4-215ENST00000574095 FLI1Q01543 452 aaPredicted RBP17.87■□□□□ 0.45
NPLOC4-215ENST00000574095 LYPD5Q6UWN5 251 aa17.87■□□□□ 0.45
NPLOC4-215ENST00000574095 PRNTQ86SH4 94 aa17.87■□□□□ 0.45
NPLOC4-215ENST00000574095 TRAV4A0A0B4J268 109 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 SIVA1O15304 175 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 NXPH4O95158 308 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 GCGP01275 180 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 CYB561D1Q8N8Q1 229 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 OR4C5Q8NGB2 326 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 KRTAP17-1Q9BYP8 105 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 C11orf21Q9P2W6 132 aa17.86■□□□□ 0.45
NPLOC4-215ENST00000574095 CTXND1A0A1B0GTU2 59 aa17.85■□□□□ 0.45
NPLOC4-215ENST00000574095 A0A1W2PRE2 83 aa17.85■□□□□ 0.45
NPLOC4-215ENST00000574095 K7EQD1 137 aa17.85■□□□□ 0.45
NPLOC4-215ENST00000574095 ARPC5O15511 151 aa17.85■□□□□ 0.45
NPLOC4-215ENST00000574095 NEGR1Q7Z3B1 354 aa17.85■□□□□ 0.45
NPLOC4-215ENST00000574095 LINC00479Q96M42 142 aa17.84■□□□□ 0.45
NPLOC4-215ENST00000574095 SMLR1H3BR10 107 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 TAAR5O14804 337 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 GYPEP15421 78 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 SRIP30626 198 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 FGF8P55075 233 aaPredicted RBP17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 UBE2G2P60604 165 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 SMUG1Q53HV7 270 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 AKR1C8PQ5T2L2 129 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 TMEM75Q8N9X5 138 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 CYTL1Q9NRR1 136 aa17.83■□□□□ 0.44
NPLOC4-215ENST00000574095 TRAV34A0A0B4J273 112 aa17.82■□□□□ 0.44
NPLOC4-215ENST00000574095 C9JCJ5 164 aa17.82■□□□□ 0.44
NPLOC4-215ENST00000574095 ZFP69Q49AA0 526 aa17.82■□□□□ 0.44
NPLOC4-215ENST00000574095 PCNPQ8WW12 178 aaKnown RBP17.82■□□□□ 0.44
NPLOC4-215ENST00000574095 C16orf90A8MZG2 172 aa17.81■□□□□ 0.44
NPLOC4-215ENST00000574095 PFN1P07737 140 aaKnown RBP17.81■□□□□ 0.44
NPLOC4-215ENST00000574095 LRP1BQ9NZR2 4599 aa17.8■□□□□ 0.44
NPLOC4-215ENST00000574095 IFNA7P01567 189 aa17.8■□□□□ 0.44
NPLOC4-215ENST00000574095 ORM1P02763 201 aa17.8■□□□□ 0.44
NPLOC4-215ENST00000574095 LINC00315P59091 139 aa17.8■□□□□ 0.44
NPLOC4-215ENST00000574095 FBLL1A6NHQ2 334 aaKnown RBP17.79■□□□□ 0.44
NPLOC4-215ENST00000574095 BTF3P20290 206 aaKnown RBP17.79■□□□□ 0.44
NPLOC4-215ENST00000574095 SAPCD1Q5SSQ6 148 aa17.79■□□□□ 0.44
NPLOC4-215ENST00000574095 LOC100131303A0A0U1RQF7 123 aa17.78■□□□□ 0.44
NPLOC4-215ENST00000574095 ZNF876PQ49A33 203 aa17.78■□□□□ 0.44
NPLOC4-215ENST00000574095 FAM74A7A6NL05 159 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 DPPA3Q6W0C5 159 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 SPATA12Q7Z6I5 190 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 C9orf85Q96MD7 179 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 ARL2-SNX15V9GYD0 113 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 RYR1P21817 5038 aa17.77■□□□□ 0.44
NPLOC4-215ENST00000574095 MAP1LC3B2A6NCE7 125 aa17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 PEX7O00628 323 aa17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 GATA1P15976 413 aaPredicted RBP17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 TXNDC17Q9BRA2 123 aa17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 MAP1LC3BQ9GZQ8 125 aa17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 TNFRSF18Q9Y5U5 241 aa17.76■□□□□ 0.43
NPLOC4-215ENST00000574095 PPT1P50897 306 aa17.75■□□□□ 0.43
NPLOC4-215ENST00000574095 WFDC10BQ8IUB3 73 aa17.75■□□□□ 0.43
NPLOC4-215ENST00000574095 PGPEP1LA6NFU8 196 aa17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 RS1O15537 224 aa17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 RNASE3P12724 160 aaKnown RBP17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 CFAP126Q5VTH2 177 aa17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 Q6ZRN7 208 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 NKX6-2Q9C056 277 aaPredicted RBP17.74■□□□□ 0.43
NPLOC4-215ENST00000574095 HSPG2P98160 4391 aa17.73■□□□□ 0.43
NPLOC4-215ENST00000574095 IGHV3-73A0A0B4J1V6 119 aa17.73■□□□□ 0.43
NPLOC4-215ENST00000574095 IGKV3D-20A0A0C4DH25 116 aa17.73■□□□□ 0.43
NPLOC4-215ENST00000574095 HIST1H2BAQ96A08 127 aa17.73■□□□□ 0.43
NPLOC4-215ENST00000574095 LY96Q9Y6Y9 160 aa17.73■□□□□ 0.43
NPLOC4-215ENST00000574095 FABP5P3A8MUU1 101 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 FHITP49789 147 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 ZNF506Q5JVG8 444 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 Q86TA4 180 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 KCNRGQ8N5I3 272 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 SLC25A29Q8N8R3 303 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 NHLRC2Q8NBF2 726 aa17.72■□□□□ 0.43
NPLOC4-215ENST00000574095 KRTAP10-2P60368 255 aa17.71■□□□□ 0.43
NPLOC4-215ENST00000574095 OR11H4Q8NGC9 324 aa17.71■□□□□ 0.43
NPLOC4-215ENST00000574095 DNAH5Q8TE73 4624 aa17.71■□□□□ 0.43
NPLOC4-215ENST00000574095 TRAV9-2A0A087WT02 112 aa17.7■□□□□ 0.42
NPLOC4-215ENST00000574095 PTH2Q96A98 100 aa17.7■□□□□ 0.42
NPLOC4-215ENST00000574095 S100A4P26447 101 aaKnown RBP17.69■□□□□ 0.42
NPLOC4-215ENST00000574095 ZNF345Q14585 488 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms