RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AGPAT2O15120 278 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BKO60814 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 IGKV1-5P01602 117 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 TRBV12-3P01733 135 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 MT-ND6P03923 174 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BJP06899 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 PYYP10082 97 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BOP23527 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BBP33778 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 SRP14P37108 136 aaKnown RBP2.7□□□□□ -1.98
SMG6-208ENST00000570874 PSMB3P49720 205 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BDP58876 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BCP62807 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 ATP5G2Q06055 141 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 FOXI1Q12951 378 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 DIAPH2-AS1Q14236 149 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST2H2BEQ16778 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 Q56UQ5 140 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 SPINK9Q5DT21 86 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 NMSQ5H8A3 153 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.7□□□□□ -1.98
SMG6-208ENST00000570874 UNQ5815/PRO19632Q6UWF5 114 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 Q6ZUT4 128 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 LINC00305Q7Z4B0 112 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 ATOH7Q8N100 152 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 C10orf126Q8N4M7 172 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 C3orf22Q8N5N4 141 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 ZNF645Q8N7E2 425 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 TMEM75Q8N9X5 138 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 ZNF114Q8NC26 417 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 OR4B1Q8NGF8 309 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 OR9G1Q8NH87 305 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 CLDND2Q8NHS1 167 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 CHCHD10Q8WYQ3 142 aaPredicted RBP2.7□□□□□ -1.98
SMG6-208ENST00000570874 H1FXQ92522 213 aaKnown RBP2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BHQ93079 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 FXYD5Q96DB9 178 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BNQ99877 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BMQ99879 126 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 C11orf68Q9H3H3 251 aaKnown RBP2.7□□□□□ -1.98
SMG6-208ENST00000570874 SDF2L1Q9HCN8 221 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 NPVFQ9HCQ7 196 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 MANBALQ9NQG1 85 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 DOPEY2Q9Y3R5 2298 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 SMG1Q96Q15 3661 aaKnown RBP2.69□□□□□ -1.98
SMG6-208ENST00000570874 ADGRG4Q8IZF6 3080 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 IGHV3OR16-13A0A075B7E8 117 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 TRAV3A0A0B4J244 114 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 IGHV1-69DA0A0B4J2H0 117 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 A0A0J9YXV3 536 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 IGLC7A0M8Q6 106 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 ZNF727A8MUV8 499 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 KLLNB2CW77 178 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 C17orf112F2Z3M2 114 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 F8W1H4 67 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 K7EP34 96 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 M0R1X1 148 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 SSSCA1O60232 199 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 YPEL1O60688 119 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 CST7O76096 145 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 HRASP01112 189 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 SAA2P0DJI9 122 aaPredicted RBP2.69□□□□□ -1.98
SMG6-208ENST00000570874 IAPPP10997 89 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 GATA2P23769 480 aaPredicted RBP2.69□□□□□ -1.98
SMG6-208ENST00000570874 VDAC2P45880 294 aaPredicted RBP2.69□□□□□ -1.98
SMG6-208ENST00000570874 ICAM4Q14773 271 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 C9orf153Q5TBE3 101 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 TEX43Q6ZNM6 134 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 FAM19A3Q7Z5A8 133 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 ZNF843Q8N446 348 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 LINC00337Q8N6G1 96 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 OR5C1Q8NGR4 320 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 OR4A5Q8NH83 315 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 ATP6V0E2Q8NHE4 81 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 TMEM190Q8WZ59 177 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 TOMM6Q96B49 74 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 LINC00526Q96FQ7 95 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 YPEL2Q96QA6 119 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 SLC39A9Q9NUM3 307 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 C11orf21Q9P2W6 132 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 DKK2Q9UBU2 259 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 LINC00312Q9Y6C7 94 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 ZZEF1O43149 2961 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 NBEAQ8NFP9 2946 aa2.69□□□□□ -1.98
SMG6-208ENST00000570874 LRBAP50851 2863 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TRAV12-2A0A075B6T6 113 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 IGHV3OR16-12A0A075B7B8 117 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 IGHV6-1A0A0B4J1U7 121 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TRAV13-1A0A0B4J241 112 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 CTXND1A0A1B0GTU2 59 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 TEX48A0A1B0GUV7 120 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 NDUFC2-KCTD14E9PQ53 114 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 H3BMG7 143 aa2.68□□□□□ -1.98
SMG6-208ENST00000570874 M0R381 172 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms