RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 LEPP41159 167 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 VAMP2P63027 116 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 RPP30P78346 268 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 IAH1Q2TAA2 248 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 OR10P1Q8NGE3 313 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 MITD1Q8WV92 249 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 TMEM170AQ8WVE7 144 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 FAM210AQ96ND0 272 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 RBKSQ9H477 322 aa4.01□□□□□ -1.77
HERPUD1-217ENST00000569429 IGHV3-64A0A075B6Q5 118 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 A0A087X0K7 114 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 TRAV4A0A0B4J268 109 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 C7orf71A4D174 169 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 GOSR2O14653 212 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 SYNGR2O43760 224 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 CFDP00746 253 aaPredicted RBP4□□□□□ -1.77
HERPUD1-217ENST00000569429 OR10J4P0C629 311 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 IAPPP10997 89 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 GATA1P15976 413 aaPredicted RBP4□□□□□ -1.77
HERPUD1-217ENST00000569429 S100A10P60903 97 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 RAB11AP62491 216 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 SPANXN5Q5MJ07 72 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 Q6ZRP5 223 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 BPIFCQ8NFQ6 507 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 OR10G9Q8NGN4 311 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 DTD1Q8TEA8 209 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 SH3BGRL3Q9H299 93 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 OR51M1Q9H341 326 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 PSENENQ9NZ42 101 aa4□□□□□ -1.77
HERPUD1-217ENST00000569429 LSM5Q9Y4Y9 91 aaKnown RBP4□□□□□ -1.77
HERPUD1-217ENST00000569429 SSSCA1O60232 199 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 SIX6O95475 246 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 CT45A10P0DMU9 189 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 PVALBP20472 110 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 S100A7P31151 101 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 RAP2BP61225 183 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 POLR2GP62487 172 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 CYCSP99999 105 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 Q0VG73 95 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 LRRC37A5PQ49AS3 106 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 NMSQ5H8A3 153 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 NIT1Q86X76 327 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 UBE2WQ96B02 151 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 LINC00479Q96M42 142 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 CIB3Q96Q77 187 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 TRGV9Q99603 122 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 MGAT4CQ9UBM8 478 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 KLK12Q9UKR0 248 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 TP53TG3Q9ULZ0 132 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 STRAPQ9Y3F4 350 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 U3KQ87 197 aa3.99□□□□□ -1.77
HERPUD1-217ENST00000569429 IGLV1-50A0A075B6I6 118 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 SMCO3A2RU48 225 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 KLLNB2CW77 178 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 H3BP45 60 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 MPDU1O75352 247 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 GIPP09681 153 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 SLC25A6P12236 298 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 RPL7P18124 248 aaKnown RBP3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 S100A1P23297 94 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 CAV2P51636 162 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 RAB32Q13637 225 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 TPRXLQ17RH7 258 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 AARDQ4LEZ3 155 aa3.98□□□□□ -1.77
HERPUD1-217ENST00000569429 A0A087WWL8 130 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 ATP6V1G1O75348 118 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 MBPP02686 304 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 NKX2-5P52952 324 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 MT1HP80294 61 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 ELOBQ15370 118 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 GUK1Q16774 197 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 SLC25A29Q8N8R3 303 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 TMEM75Q8N9X5 138 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 OR4C5Q8NGB2 326 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 OR2T35Q8NGX2 323 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 LYPD6BQ8NI32 183 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 LRRC20Q8TCA0 184 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 SMIM8Q96KF7 97 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 HSPB11Q9Y547 144 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 URGCP-MRPS24S4R325 110 aa3.97□□□□□ -1.77
HERPUD1-217ENST00000569429 TRBV6-4A0A1B0GX49 114 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 FAM24AA6NFZ4 105 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 HMSDA8MTL9 139 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 H3BRN7 92 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 K7EPK0 472 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 IFNA7P01567 189 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 METTL15P1P0C7V9 234 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 CXCL2P19875 107 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 GPX4P36969 197 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 AKR1C1Q04828 323 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 BTN1A1Q13410 526 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 OPCMLQ14982 345 aa3.96□□□□□ -1.78
HERPUD1-217ENST00000569429 RHOHQ15669 191 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms