RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 FAM162BQ5T6X4 162 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 SEC11CQ9BY50 192 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 F8W036 122 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 H7BYZ3 331 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 SH2D1AO60880 128 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 ZNF324O75467 553 aaPredicted RBP7.58□□□□□ -1.2
CDH3-210ENST00000569117 MGST1P10620 155 aaKnown RBP7.58□□□□□ -1.2
CDH3-210ENST00000569117 CRIP1P50238 77 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 C10orf91Q5T1B1 145 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
CDH3-210ENST00000569117 SLC7A5P1Q8MH63 180 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 RCHY1Q96PM5 261 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 GOLT1BQ9Y3E0 138 aa7.58□□□□□ -1.2
CDH3-210ENST00000569117 C19orf71A6NCJ1 209 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 FABP5P3A8MUU1 101 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 RPL23P62829 140 aaKnown RBP7.57□□□□□ -1.2
CDH3-210ENST00000569117 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
CDH3-210ENST00000569117 PRR27Q6MZM9 219 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 Q6ZQT7 251 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 SBSPONQ8IVN8 264 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 RNF183Q96D59 192 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 TM2D3Q9BRN9 247 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 SDF2L1Q9HCN8 221 aa7.57□□□□□ -1.2
CDH3-210ENST00000569117 CARHSP1Q9Y2V2 147 aaKnown RBP7.57□□□□□ -1.2
CDH3-210ENST00000569117 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 OR5I1Q13606 314 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 ADIRFQ15847 76 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 ISOC2Q96AB3 205 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 NEU1Q99519 415 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 TMEM208Q9BTX3 173 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 C11orf21Q9P2W6 132 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
CDH3-210ENST00000569117 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 SPRY2O43597 315 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
CDH3-210ENST00000569117 KCNS1Q96KK3 526 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 LINC01587Q99440 93 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 NAGKQ9UJ70 344 aa7.55□□□□□ -1.2
CDH3-210ENST00000569117 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
CDH3-210ENST00000569117 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 SMIM9A6NGZ8 99 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 P01737 135 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 CXCL1P09341 107 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 ANXA2RQ3ZCQ2 193 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 MUC21Q5SSG8 566 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 OR11H2Q8NH07 326 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
CDH3-210ENST00000569117 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 RNASE7Q9H1E1 156 aaKnown RBP7.54□□□□□ -1.2
CDH3-210ENST00000569117 RETNQ9HD89 108 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
CDH3-210ENST00000569117 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 B4DEV8 164 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 M0R036 132 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 ORM1P02763 201 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 TYMSP04818 313 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 MIFP14174 115 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 Q8NAQ8 132 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 RNASE8Q8TDE3 154 aaKnown RBP7.53□□□□□ -1.2
CDH3-210ENST00000569117 TMEM263Q8WUH6 116 aaKnown RBP7.53□□□□□ -1.2
CDH3-210ENST00000569117 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
CDH3-210ENST00000569117 NBEAL2Q6ZNJ1 2754 aa7.53□□□□□ -1.2
CDH3-210ENST00000569117 TMEM189A5PLL7 270 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 CBY3A6NI87 242 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 ZNF705GA8MUZ8 300 aaPredicted RBP7.52□□□□□ -1.21
CDH3-210ENST00000569117 RPL19P84098 196 aaKnown RBP7.52□□□□□ -1.21
CDH3-210ENST00000569117 DNLZQ5SXM8 178 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 C15orf54Q8N8G6 183 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 OR2D3Q8NGH3 330 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 IL17DQ8TAD2 202 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 C16orf74Q96GX8 76 aa7.52□□□□□ -1.21
CDH3-210ENST00000569117 IGHV3-16A0A0C4DH30 117 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 GATCO43716 136 aaKnown RBP7.51□□□□□ -1.21
CDH3-210ENST00000569117 HTN1P15515 57 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 ASIPP42127 132 aa7.51□□□□□ -1.21
CDH3-210ENST00000569117 RPS20P60866 119 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms