RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 MGST1P10620 155 aaKnown RBP6.12□□□□□ -1.43
SF3B3-212ENST00000568539 ADCYAP1P18509 176 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 FAM162BQ5T6X4 162 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 PRR27Q6MZM9 219 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 SLC7A5P1Q8MH63 180 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 LINC01587Q99440 93 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 PYGO2Q9BRQ0 406 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 TMEM208Q9BTX3 173 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 NAT8Q9UHE5 227 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 NOTCH3Q9UM47 2321 aa6.12□□□□□ -1.43
SF3B3-212ENST00000568539 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 RPL23P62829 140 aaKnown RBP6.11□□□□□ -1.43
SF3B3-212ENST00000568539 OR5I1Q13606 314 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 NDUFA5Q16718 116 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 TDRG1Q3Y452 100 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 MUC21Q5SSG8 566 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 OR11H2Q8NH07 326 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 NEU1Q99519 415 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 SDF2L1Q9HCN8 221 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 BIN3Q9NQY0 253 aa6.11□□□□□ -1.43
SF3B3-212ENST00000568539 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 IGKV3D-20A0A0C4DH25 116 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 SMIM9A6NGZ8 99 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 ZNF705GA8MUZ8 300 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-212ENST00000568539 F8W036 122 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 PRM2P04554 102 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 FAM159AQ6UWV7 190 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 ISOC2Q96AB3 205 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 SEC11CQ9BY50 192 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 NAGKQ9UJ70 344 aa6.1□□□□□ -1.43
SF3B3-212ENST00000568539 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 CBY3A6NI87 242 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 KRBOX1C9JBD0 128 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 M0R036 132 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 NHLRC4P0CG21 123 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-212ENST00000568539 MIFP14174 115 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 HTN1P15515 57 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 AZU1P20160 251 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 ADIRFQ15847 76 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 RRN3P1Q2M238 152 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 C10orf91Q5T1B1 145 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 FAM231DQ6ZW35 169 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 ZNF575Q86XF7 245 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 Q8NAQ8 132 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 NUDT10Q8NFP7 164 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 RNASE8Q8TDE3 154 aaKnown RBP6.09□□□□□ -1.43
SF3B3-212ENST00000568539 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
SF3B3-212ENST00000568539 NUDT11Q96G61 164 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 KCNS1Q96KK3 526 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
SF3B3-212ENST00000568539 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 TP53TG3Q9ULZ0 132 aa6.09□□□□□ -1.43
SF3B3-212ENST00000568539 CARHSP1Q9Y2V2 147 aaKnown RBP6.09□□□□□ -1.43
SF3B3-212ENST00000568539 IGHV4-28A0A0C4DH34 117 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 PLAC8L1A1L4L8 177 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 B4DEV8 164 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 GNRH2O43555 120 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 P01737 135 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 ORM1P02763 201 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 TYMSP04818 313 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 ERVFC1-1P60608 527 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 RPL19P84098 196 aaKnown RBP6.08□□□□□ -1.44
SF3B3-212ENST00000568539 PNRC1Q12796 327 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-212ENST00000568539 IBA57Q5T440 356 aaKnown RBP6.08□□□□□ -1.44
SF3B3-212ENST00000568539 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
SF3B3-212ENST00000568539 OSTCQ9NRP0 149 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 HYDINQ4G0P3 5121 aa6.08□□□□□ -1.44
SF3B3-212ENST00000568539 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 TMSB15BA0A087X1C1 80 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 IGHV3-16A0A0C4DH30 117 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 GRIFINA4D1Z8 144 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 TMEM189A5PLL7 270 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 CXCL1P09341 107 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 DNLZQ5SXM8 178 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 OR2D3Q8NGH3 330 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 C16orf74Q96GX8 76 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 SFRP2Q96HF1 295 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
SF3B3-212ENST00000568539 MDFICQ9P1T7 246 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
SF3B3-212ENST00000568539 DEFB4AO15263 64 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 GATCO43716 136 aaKnown RBP6.06□□□□□ -1.44
SF3B3-212ENST00000568539 RNASE3P12724 160 aaKnown RBP6.06□□□□□ -1.44
SF3B3-212ENST00000568539 ASIPP42127 132 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 TCL1AP56279 114 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 RPS20P60866 119 aaKnown RBP6.06□□□□□ -1.44
SF3B3-212ENST00000568539 ZNF415Q09FC8 603 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 C15orf54Q8N8G6 183 aa6.06□□□□□ -1.44
SF3B3-212ENST00000568539 OR10G8Q8NGN5 311 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms