RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PTPN13Q12923 2485 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 WNK1Q9H4A3 2382 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 CSMD2Q7Z408 3487 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 DPM2O94777 84 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 IGLC6P0CF74 106 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 RPS20P60866 119 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 RNF5Q99942 180 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 PHLDA3Q9Y5J5 127 aa6.89□□□□□ -1.31
HDGFL3-206ENST00000568294 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 A0A087WWL8 130 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 GNRH2O43555 120 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 LY6G5BQ8NDX9 201 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 LINC00477Q96M19 166 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 GTSF1LQ9H1H1 148 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 AGRNO00468 2067 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 K7EP34 96 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 PF4P02776 101 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 ATP5G2Q06055 141 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 HIST2H2BDQ6DRA6 164 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 SCGB1D4Q6XE38 83 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 MYO18BQ8IUG5 2567 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 H3BMG7 143 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 H3BRM9 83 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 EEF1AKMT3Q96AZ1 226 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 JPT2Q9H910 190 aa6.88□□□□□ -1.31
HDGFL3-206ENST00000568294 TEX48A0A1B0GUV7 120 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 MYO9AB2RTY4 2548 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 H7C2G1 150 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 M0R1W7 72 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 APOMO95445 188 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 MAPK1IP1LQ8NDC0 245 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 OR9G4Q8NGQ1 327 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 NACAE9PAV3 2078 aa6.87□□□□□ -1.31
HDGFL3-206ENST00000568294 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 PAX8Q06710 450 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 LAGE3Q14657 143 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 OR4X2Q8NGF9 303 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 DUX5Q96PT3 197 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 U3KQK5 164 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 UTP20O75691 2785 aaKnown RBP6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 CLPSL1A2RUU4 121 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 Q6ZS46 218 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 KLHL30-AS1Q8NEE0 82 aa6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
HDGFL3-206ENST00000568294 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 NPFFO15130 113 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 WFDC2Q14508 124 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 ZNF256Q9Y2P7 627 aaPredicted RBP6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 TRAV41A0A0B4J266 112 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 OR11H12B2RN74 326 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 BLCAPP62952 87 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 ZNF575Q86XF7 245 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 OR11H1Q8NG94 326 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 OR10J6PQ8NGY7 276 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 OR11H2Q8NH07 326 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 ZNF479Q96JC4 524 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 Q8N8P6 123 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 NRGNQ92686 78 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 DPF1Q92782 380 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
HDGFL3-206ENST00000568294 H3BUX3 64 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 C19orf84I3L1E1 186 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 PPBPP02775 128 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 CELSR2Q9HCU4 2923 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 IGHV3-73A0A0B4J1V6 119 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 TRAV12-3A0A0B4J271 114 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 IGHV4-38-2P0DP08 117 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 LINC01559Q495D7 138 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 SLC50A1Q9BRV3 221 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 NPFFR1Q9GZQ6 430 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 SIRPDQ9H106 197 aa6.84□□□□□ -1.31
HDGFL3-206ENST00000568294 IGHV7-4-1A0A0J9YVY3 117 aa6.83□□□□□ -1.32
HDGFL3-206ENST00000568294 PAX2Q02962 417 aa6.83□□□□□ -1.32
HDGFL3-206ENST00000568294 CCDC168Q8NDH2 2452 aa6.83□□□□□ -1.32
HDGFL3-206ENST00000568294 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms