RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TRGV1A0A0A0MS02 117 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 RTL8CO15255 209 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 GNRH2O43555 120 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 TYMSP04818 313 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 PFN1P07737 140 aaKnown RBP5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 OR5I1Q13606 314 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 LGALSLQ3ZCW2 172 aaPredicted RBP5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 MUC21Q5SSG8 566 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 DNLZQ5SXM8 178 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 TMUB2Q71RG4 321 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 NDFIP1Q9BT67 221 aa5.67□□□□□ -1.5
HDGFL3-205ENST00000568129 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 TRAV1-1A0A0B4J248 108 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 MAP1LC3B2A6NCE7 125 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 M0R2P5 195 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 PEX7O00628 323 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 CIDEAO60543 219 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 NUDT3O95989 172 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 BTF3P20290 206 aaKnown RBP5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 CRYBA4P53673 196 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 FGF8P55075 233 aaPredicted RBP5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 CCL18P55774 89 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 EIF5AP63241 154 aaKnown RBP5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 TMEM183BQ1AE95 376 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 ESRGQ1W209 222 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 SMUG1Q53HV7 270 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 PIK3CD-AS1Q5SR53 167 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 TMEM183AQ8IXX5 376 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 LINC00479Q96M42 142 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 C9orf85Q96MD7 179 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 MAP1LC3BQ9GZQ8 125 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 RPH3ALQ9UNE2 315 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 ZFP30Q9Y2G7 519 aa5.66□□□□□ -1.5
HDGFL3-205ENST00000568129 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 TRAV4A0A0B4J268 109 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 KANTRA0A1W2PQU2 76 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 F6UZH7 168 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 GCGP01275 180 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 C1QBP02746 253 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 CRIP1P50238 77 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 RAB5CP51148 216 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 UBE2DNLQ8IWF7 75 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 ZNF471Q9BX82 626 aaPredicted RBP5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 SDF2L1Q9HCN8 221 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 HHLA3Q9XRX5 114 aa5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 MRPS16Q9Y3D3 137 aaKnown RBP5.65□□□□□ -1.5
HDGFL3-205ENST00000568129 DYNC1H1Q14204 4646 aaKnown RBP5.65□□□□□ -1.51
HDGFL3-205ENST00000568129 TRAV34A0A0B4J273 112 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 A0A0J9YY99 117 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 FABP5P3A8MUU1 101 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 LTAP01374 205 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 IFNA7P01567 189 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 TPT1P13693 172 aaKnown RBP5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 PPT1P50897 306 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 UBE2G2P60604 165 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 ZNF674Q2M3X9 581 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 FMC1Q96HJ9 113 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 ZNF479Q96JC4 524 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 Q9H8V8 135 aa5.64□□□□□ -1.51
HDGFL3-205ENST00000568129 A0A1W2PPQ1 181 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 M0R2N4 97 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 RS1O15537 224 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 PAX4O43316 350 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 S100A9P06702 114 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 H2AFB1P0C5Y9 115 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 SULT1A2P50226 295 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 Q86TA4 180 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 SFT2D1Q8WV19 159 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 MLST8Q9BVC4 326 aa5.63□□□□□ -1.51
HDGFL3-205ENST00000568129 IGLV2-18A0A075B6J9 118 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 PGPEP1LA6NFU8 196 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 KRBOX1C9JBD0 128 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 PAGE4O60829 102 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 ORM1P02763 201 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 GATA1P15976 413 aaPredicted RBP5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 TIRAPP58753 221 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 ZFP69Q49AA0 526 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 C1orf134Q5TEV5 83 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 CFAP126Q5VTH2 177 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 LYPD5Q6UWN5 251 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 SLC51BQ86UW2 128 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 FAM213BQ8TBF2 198 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 ZC2HC1AQ96GY0 325 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 TXNDC17Q9BRA2 123 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 SCRT2Q9NQ03 307 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 IL36BQ9NZH7 164 aa5.62□□□□□ -1.51
HDGFL3-205ENST00000568129 NAGKQ9UJ70 344 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms