RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CFHR4Q92496 578 aa9.78□□□□□ -0.84
CSPG4P13-202ENST00000567704 IGLV3-9A0A075B6K5 115 aa9.77□□□□□ -0.84
CSPG4P13-202ENST00000567704 A0A1W2PRX2 142 aa9.77□□□□□ -0.84
CSPG4P13-202ENST00000567704 C22orf46C9J442 243 aa9.77□□□□□ -0.84
CSPG4P13-202ENST00000567704 C6orf226Q5I0X4 101 aa9.77□□□□□ -0.84
CSPG4P13-202ENST00000567704 SHISA9B4DS77 424 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 ZNF415Q09FC8 603 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 I3L3M4 83 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 SOCS3O14543 225 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 TRACP01848 142 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 PTH2Q96A98 100 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 E7EQL1 145 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 RNF138Q8WVD3 245 aa9.77□□□□□ -0.85
CSPG4P13-202ENST00000567704 H3BUX3 64 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 UTF1Q5T230 341 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 KLK9Q9UKQ9 250 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 ZNF493Q6ZR52 646 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 PRO3102Q9H379 93 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 U3KQA8 63 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 OBSL1O75147 1896 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 HTN3P15516 51 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 FOXE3Q13461 319 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 C3orf56Q8N813 242 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGLV1-44P01699 117 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
CSPG4P13-202ENST00000567704 SAA4P35542 130 aa9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 DAZ1Q9NQZ3 744 aaKnown RBP9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 RNASE13Q5GAN3 156 aaKnown RBP9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 ZNF503Q96F45 646 aa9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGLV2-8P01709 118 aa9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 PRSS22Q9GZN4 317 aa9.75□□□□□ -0.85
CSPG4P13-202ENST00000567704 A4D1N5 150 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGKV1-17P01599 117 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 CR1LQ2VPA4 569 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 RNF114Q9Y508 228 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 FAM223BA6NKX1 122 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 VWC2LB2RUY7 222 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 CRIP3Q6Q6R5 217 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 FAM223AQ8IWN6 122 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 MRPL36Q9P0J6 103 aaKnown RBP9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 SPRNQ5BIV9 151 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 TICRRQ7Z2Z1 1910 aa9.74□□□□□ -0.85
CSPG4P13-202ENST00000567704 TRAV12-2A0A075B6T6 113 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 ODF1Q14990 250 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGHG4P01861 327 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 PCNX3Q9H6A9 2034 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 A0A1B0GXF2 115 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 GNRH2O43555 120 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
CSPG4P13-202ENST00000567704 PRR14LQ5THK1 2151 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 PFN2P35080 140 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 LINC00322Q6ZN03 302 aaPredicted RBP9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 RNF183Q96D59 192 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 TMEM126AQ9H061 195 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 P0C879 139 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 WNK1Q9H4A3 2382 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 C19orf71A6NCJ1 209 aa9.72□□□□□ -0.85
CSPG4P13-202ENST00000567704 LINC01620Q4KN68 170 aa9.71□□□□□ -0.85
CSPG4P13-202ENST00000567704 GOLGB1Q14789 3259 aaKnown RBP9.71□□□□□ -0.85
CSPG4P13-202ENST00000567704 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.85
CSPG4P13-202ENST00000567704 E7EUB6 86 aa9.71□□□□□ -0.85
CSPG4P13-202ENST00000567704 RITA1Q96K30 269 aa9.71□□□□□ -0.85
CSPG4P13-202ENST00000567704 F6UB75 175 aa9.71□□□□□ -0.86
CSPG4P13-202ENST00000567704 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
CSPG4P13-202ENST00000567704 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.86
CSPG4P13-202ENST00000567704 DEFB131AP59861 70 aa9.71□□□□□ -0.86
CSPG4P13-202ENST00000567704 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
CSPG4P13-202ENST00000567704 COX6B1P14854 86 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 BRWD1-AS2P59051 145 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 HAMPP81172 84 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 PF4P02776 101 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 FAM236AA0A1B0GUQ0 79 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 FAM236BA0A1B0GV22 79 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 I3L2K1 104 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 K7EIM0 57 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 IGFBPL1Q8WX77 278 aa9.7□□□□□ -0.86
CSPG4P13-202ENST00000567704 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 Q6ZS92 163 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 PROP1O75360 226 aa9.69□□□□□ -0.86
CSPG4P13-202ENST00000567704 CTSZQ9UBR2 303 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms