RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SDK1Q7Z5N4 2213 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 BCORL1Q5H9F3 1711 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 TRAV12-2A0A075B6T6 113 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 IGHV1-24A0A0C4DH33 117 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 PVALEFA0A1B0GWK0 134 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 AKAIN1P0CW23 69 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 HIST1H1DP16402 221 aaKnown RBP1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 ETV6P41212 452 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 GUCA1AP43080 201 aaPredicted RBP1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 RBP2P50120 134 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 BTG2P78543 158 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 ELOBQ15370 118 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 SNRNP25Q9BV90 132 aaKnown RBP1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 CECR2Q9BXF3 1484 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 ANK1P16157 1881 aa1.47□□□□□ -2.17
SHCBP1-206ENST00000567698 PTPRFP10586 1907 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 A2ML1A8K2U0 1454 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 UQCRHLA0A096LP55 91 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 PNMA8CA0A1B0GUJ8 204 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 BBIP1A8MTZ0 92 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 EDF1O60869 148 aaKnown RBP1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 RBP4P02753 201 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 UQCRHP07919 91 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 CXCL8P10145 99 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 RNASE3P12724 160 aaKnown RBP1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 ATP11AUNQ6ZP68 121 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 FP248Q71RG6 208 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 ATOH7Q8N100 152 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 LSM10Q969L4 123 aaKnown RBP1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 PSMG3Q9BT73 122 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 PDCD10Q9BUL8 212 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 SEC11CQ9BY50 192 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 AGPAT4-IT1Q9H0P7 198 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 ZFP30Q9Y2G7 519 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 RP1P56715 2156 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 LRP5O75197 1615 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 CLIP1P30622 1438 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 VPS8Q8N3P4 1428 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 ANKRD36BQ8N2N9 1353 aa1.46□□□□□ -2.18
SHCBP1-206ENST00000567698 COL4A1P02462 1669 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 MYOM2P54296 1465 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 C20orf202A1L168 122 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 BRS3P32247 399 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 SNX29P2Q8IUI4 249 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 KCNRGQ8N5I3 272 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 ATP6V0E2Q8NHE4 81 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 SAR1AQ9NR31 198 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 MUC4Q99102 2169 aa1.45□□□□□ -2.18
SHCBP1-206ENST00000567698 PZPP20742 1482 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 RP1L1Q8IWN7 2480 aaPredicted RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 PLXNA2O75051 1894 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 TRAV14DV4A0A0A6YYC5 116 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 IFITM5A6NNB3 132 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 ZNF736B4DX44 427 aaPredicted RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 CCL25O15444 150 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 S100A8P05109 93 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 MRPS10P82664 201 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 CASC2Q6XLA1 102 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 SLC25A26Q70HW3 274 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 PATE1Q8WXA2 126 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 PPP3R2Q96LZ3 170 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 RERGLQ9H628 205 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 NOP16Q9Y3C1 178 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 PCDH15Q96QU1 1955 aa1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 DIDO1Q9BTC0 2240 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-206ENST00000567698 SIP14410 1827 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 TENM1Q9UKZ4 2725 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 TRBV6-8A0A0A6YYG3 113 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 YPEL1O60688 119 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 HYPMO75409 117 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 SNAPC5O75971 98 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 ADCYAP1P18509 176 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 GNG4P50150 75 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 GNG2P59768 71 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 CATR1Q13166 79 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 LINC01545Q5VT33 79 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 C2orf82Q6UX34 121 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 Q6ZS92 163 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 C15orf53Q8NAA6 179 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 C5orf17Q8NAS9 161 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 LINC00052Q96N35 136 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 SMIM7Q9BQ49 75 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 TAS2R8Q9NYW2 309 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 ZFYVE16Q7Z3T8 1539 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 MUC22E2RYF6 1773 aaPredicted RBP1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 CFTRP13569 1480 aa1.43□□□□□ -2.18
SHCBP1-206ENST00000567698 BAZ2BQ9UIF8 2168 aaKnown RBP1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 NAIPQ13075 1403 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 FREM3P0C091 2139 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 HEATR1Q9H583 2144 aaKnown RBP1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 MCM3APO60318 1980 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 J3QLW9 94 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 CCL16O15467 120 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 PPP3R1P63098 170 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 C10orf55Q5SWW7 151 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 TEX261Q6UWH6 196 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 GKN2Q86XP6 184 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 VSTM2AQ8TAG5 236 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms