RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 MSRB1Q9NZV6 116 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 OVOL1O14753 267 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 IGHV4-59P01825 116 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 Q6ZS46 218 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 MCRIP2Q9BUT9 160 aaKnown RBP13.51□□□□□ -0.25
CMTM3-214ENST00000567572 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
CMTM3-214ENST00000567572 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 SIVA1O15304 175 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 HIST2H2BCQ6DN03 193 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 Q8N8P6 123 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 OR9G4Q8NGQ1 327 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 ZNF580Q9UK33 172 aa13.5□□□□□ -0.25
CMTM3-214ENST00000567572 SEC11AP67812 179 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 C2orf91Q6ZV80 131 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 C11orf21Q9P2W6 132 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 DOPEY2Q9Y3R5 2298 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 CD5LO43866 347 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 FGF6P10767 208 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 PCP4P48539 62 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 PTTG1IPP53801 180 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
CMTM3-214ENST00000567572 CSPG4Q6UVK1 2322 aa13.48□□□□□ -0.25
CMTM3-214ENST00000567572 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
CMTM3-214ENST00000567572 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
CMTM3-214ENST00000567572 SMPXQ9UHP9 88 aa13.48□□□□□ -0.25
CMTM3-214ENST00000567572 ZNF207O43670 478 aaKnown RBP13.47□□□□□ -0.25
CMTM3-214ENST00000567572 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 OR2K2Q8NGT1 345 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 A0A0G2JLM5 398 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 SOCS3O14543 225 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 TAX1BP3O14907 124 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 CFHR3Q02985 330 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 SAMD13Q5VXD3 122 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 OR10J6PQ8NGY7 276 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
CMTM3-214ENST00000567572 NBPF19A0A087WUL8 3843 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 CREBBPQ92793 2442 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 IGHV3-49A0A0A0MS15 119 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 ATP5LO75964 103 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 IGLV1-40P01703 118 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 LEPP41159 167 aa13.46□□□□□ -0.25
CMTM3-214ENST00000567572 IGLV2-18A0A075B6J9 118 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 SMAD7O15105 426 aaKnown RBP13.45□□□□□ -0.26
CMTM3-214ENST00000567572 CCL25O15444 150 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 ZMAT4Q9H898 229 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 C21orf62-AS1Q17RA5 79 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 SPANXN1Q5VSR9 72 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 Q6YL49 198 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 APRG1Q8IVJ8 170 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 OR4X2Q8NGF9 303 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
CMTM3-214ENST00000567572 FOXE3Q13461 319 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 KIR3DS1Q14943 382 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 TMEM97Q5BJF2 176 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 NRACQ8N912 160 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 WFDC11Q8NEX6 87 aa13.44□□□□□ -0.26
CMTM3-214ENST00000567572 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
CMTM3-214ENST00000567572 EVI2AP22794 236 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 HSD52Q0P140 79 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 UNQ9165/PRO28630Q6UXU0 137 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 ZFAND2AQ8N6M9 145 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 KLK15Q9H2R5 256 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 K7EMI3 77 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 ODF1Q14990 250 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 C20orf173Q96LM9 149 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 FAM19A4Q96LR4 140 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
CMTM3-214ENST00000567572 PF4V1P10720 104 aa13.42□□□□□ -0.26
CMTM3-214ENST00000567572 TMEM95Q3KNT9 176 aa13.42□□□□□ -0.26
CMTM3-214ENST00000567572 MXRA5Q9NR99 2828 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 TRBV12-3P01733 135 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 LAGE3Q14657 143 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 PEF1Q9UBV8 284 aaKnown RBP13.41□□□□□ -0.26
CMTM3-214ENST00000567572 TEX15Q9BXT5 2789 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 PDZD2O15018 2839 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 A6NDN8 102 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 K7EMT4 169 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 GAS8-AS1O95177 125 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 FXYD7P58549 80 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 VAMP3Q15836 100 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 TMEM158Q8WZ71 300 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
CMTM3-214ENST00000567572 UFC1Q9Y3C8 167 aa13.41□□□□□ -0.26
CMTM3-214ENST00000567572 ITPR3Q14573 2671 aa13.4□□□□□ -0.26
CMTM3-214ENST00000567572 K7EP13 123 aa13.4□□□□□ -0.26
CMTM3-214ENST00000567572 ASIPP42127 132 aa13.4□□□□□ -0.26
CMTM3-214ENST00000567572 PRR9Q5T870 116 aa13.4□□□□□ -0.26
CMTM3-214ENST00000567572 Q6ZVH6 145 aa13.4□□□□□ -0.26
CMTM3-214ENST00000567572 H3BVH4 76 aa13.39□□□□□ -0.27
CMTM3-214ENST00000567572 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
CMTM3-214ENST00000567572 DKK2Q9UBU2 259 aa13.39□□□□□ -0.27
CMTM3-214ENST00000567572 TMEM89A2RUT3 159 aa13.39□□□□□ -0.27
CMTM3-214ENST00000567572 M0R381 172 aa13.39□□□□□ -0.27
CMTM3-214ENST00000567572 HOXA3O43365 443 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms