RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 OR2G3Q8NGZ4 309 aa7.03□□□□□ -1.28
GTF3C1-206ENST00000566779 LINC00467Q9BRT7 94 aa7.03□□□□□ -1.28
GTF3C1-206ENST00000566779 PSMG3Q9BT73 122 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-206ENST00000566779 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-206ENST00000566779 MDFICQ9P1T7 246 aa7.03□□□□□ -1.28
GTF3C1-206ENST00000566779 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 RNF222A6NCQ9 220 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 K7EQM0 130 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 MBP02144 154 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 FGF8P55075 233 aaPredicted RBP7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 ST6GAL2Q96JF0 529 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 TNFSF18Q9UNG2 199 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 ICOSQ9Y6W8 199 aa7.02□□□□□ -1.29
GTF3C1-206ENST00000566779 A0A087WWL8 130 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 TRBV7-9A0A0J9YWB2 115 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 GNRH2O43555 120 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 CXorf1O96002 111 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 IFNA7P01567 189 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 STAG3L2P0CL84 134 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 STAG3L3P0CL85 134 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 ESRGQ1W209 222 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 ZFP69Q49AA0 526 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 AKR1C8PQ5T2L2 129 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 Q6AWC8 147 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 ZNF575Q86XF7 245 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 C5orf17Q8NAS9 161 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 Q9H8V8 135 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 SDF2L1Q9HCN8 221 aa7.01□□□□□ -1.29
GTF3C1-206ENST00000566779 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 A0A1B0GVY2 172 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 GGTLC3B5MD39 225 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 C9JCJ5 164 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 TCRAP04437 139 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 TYMSP04818 313 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 SERF2P84101 59 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 PCNPQ8WW12 178 aaKnown RBP7□□□□□ -1.29
GTF3C1-206ENST00000566779 ASB13Q8WXK3 278 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 TVP23CQ96ET8 276 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 TMEM167BQ9NRX6 74 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 MRPS16Q9Y3D3 137 aaKnown RBP7□□□□□ -1.29
GTF3C1-206ENST00000566779 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
GTF3C1-206ENST00000566779 TRAV34A0A0B4J273 112 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 IGHV3-16A0A0C4DH30 117 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 A0A1B0GV50 99 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 GCGP01275 180 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 TTC32Q5I0X7 151 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 CYB561D1Q8N8Q1 229 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 TMEM75Q8N9X5 138 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 OR4C5Q8NGB2 326 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 TMED6Q8WW62 240 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 ZNF479Q96JC4 524 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 PSG8Q9UQ74 426 aa6.99□□□□□ -1.29
GTF3C1-206ENST00000566779 CTXND1A0A1B0GTU2 59 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 MAP1LC3B2A6NCE7 125 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 H3BNG1 76 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 NXPH4O95158 308 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 SRIP30626 198 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 CRYBA4P53673 196 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 LINC00310P59036 64 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 FLI1Q01543 452 aaPredicted RBP6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 ZNF726P1Q15940 193 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 NHLRC2Q8NBF2 726 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 SPXQ9BT56 116 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 KRTAP1-5Q9BYS1 174 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 MAP1LC3BQ9GZQ8 125 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
GTF3C1-206ENST00000566779 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 SERTM2A0A1B0GWG4 89 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 G3V3Q6 166 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 M0R2P5 195 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 ZNF80P51504 273 aaPredicted RBP6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 FHL2Q14192 279 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 SMUG1Q53HV7 270 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 Q8N3U1 123 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 KCNS1Q96KK3 526 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 LINC00479Q96M42 142 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 C18orf15Q96N68 181 aa6.97□□□□□ -1.29
GTF3C1-206ENST00000566779 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 LOC100131303A0A0U1RQF7 123 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 C16orf90A8MZG2 172 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 PEX7O00628 323 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 SIVA1O15304 175 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 PPT1P50897 306 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 PTTG1IPP53801 180 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 MRPL23Q16540 153 aaKnown RBP6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 CST9LP1Q5W188 147 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 Q86TA4 180 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 ARL2-SNX15V9GYD0 113 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.3
GTF3C1-206ENST00000566779 M0R036 132 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 TAAR5O14804 337 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 IGLV2-11P01706 119 aa6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 PFN1P07737 140 aaKnown RBP6.95□□□□□ -1.3
GTF3C1-206ENST00000566779 S100A4P26447 101 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms