RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TRAV21A0A0B4J279 112 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 TYMSP04818 313 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 SUMO1P63165 101 aaKnown RBP10.05□□□□□ -0.8
FANCA-220ENST00000566409 IQCF2Q8IXL9 164 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
FANCA-220ENST00000566409 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 ICOSQ9Y6W8 199 aa10.05□□□□□ -0.8
FANCA-220ENST00000566409 RYR1P21817 5038 aa10.04□□□□□ -0.8
FANCA-220ENST00000566409 CXorf1O96002 111 aa10.04□□□□□ -0.8
FANCA-220ENST00000566409 PSG8Q9UQ74 426 aa10.04□□□□□ -0.8
FANCA-220ENST00000566409 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 A0A1W2PPQ1 181 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 SLAQ13239 276 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 RGS21Q2M5E4 152 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 TTC32Q5I0X7 151 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 TMEM167BQ9NRX6 74 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 EPDR1Q9UM22 224 aa10.03□□□□□ -0.8
FANCA-220ENST00000566409 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 K7EQD1 137 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 M0R2P5 195 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 LINC00479Q96M42 142 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
FANCA-220ENST00000566409 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 A0A1W2PRE2 83 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 SIVA1O15304 175 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 NXPH4O95158 308 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 FLI1Q01543 452 aaPredicted RBP10.01□□□□□ -0.81
FANCA-220ENST00000566409 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
FANCA-220ENST00000566409 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 TMEM75Q8N9X5 138 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 SDF2L1Q9HCN8 221 aa10.01□□□□□ -0.81
FANCA-220ENST00000566409 CTXND1A0A1B0GTU2 59 aa10□□□□□ -0.81
FANCA-220ENST00000566409 ARPC5O15511 151 aa10□□□□□ -0.81
FANCA-220ENST00000566409 GCGP01275 180 aa10□□□□□ -0.81
FANCA-220ENST00000566409 GYPEP15421 78 aa10□□□□□ -0.81
FANCA-220ENST00000566409 FGF8P55075 233 aaPredicted RBP10□□□□□ -0.81
FANCA-220ENST00000566409 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
FANCA-220ENST00000566409 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
FANCA-220ENST00000566409 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
FANCA-220ENST00000566409 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
FANCA-220ENST00000566409 KCNS1Q96KK3 526 aa10□□□□□ -0.81
FANCA-220ENST00000566409 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
FANCA-220ENST00000566409 APOBP04114 4563 aaKnown RBP9.99□□□□□ -0.81
FANCA-220ENST00000566409 TRAV34A0A0B4J273 112 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 K7EQM0 130 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 PFN1P07737 140 aaKnown RBP9.99□□□□□ -0.81
FANCA-220ENST00000566409 LINC00315P59091 139 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 DPPA3Q6W0C5 159 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
FANCA-220ENST00000566409 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
FANCA-220ENST00000566409 TAAR5O14804 337 aa9.98□□□□□ -0.81
FANCA-220ENST00000566409 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
FANCA-220ENST00000566409 UBE2G2P60604 165 aa9.98□□□□□ -0.81
FANCA-220ENST00000566409 SMUG1Q53HV7 270 aa9.98□□□□□ -0.81
FANCA-220ENST00000566409 C9orf85Q96MD7 179 aa9.98□□□□□ -0.81
FANCA-220ENST00000566409 IGKV3D-20A0A0C4DH25 116 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 FAM74A7A6NL05 159 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 C9JCJ5 164 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 ORM1P02763 201 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 RNASE3P12724 160 aaKnown RBP9.97□□□□□ -0.81
FANCA-220ENST00000566409 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
FANCA-220ENST00000566409 SRIP30626 198 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 OR11H4Q8NGC9 324 aa9.97□□□□□ -0.81
FANCA-220ENST00000566409 PGPEP1LA6NFU8 196 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
FANCA-220ENST00000566409 FHITP49789 147 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 SAPCD1Q5SSQ6 148 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
FANCA-220ENST00000566409 PEX7O00628 323 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 RS1O15537 224 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 IFNA7P01567 189 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 CRIP1P50238 77 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 ZNF506Q5JVG8 444 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 PCNPQ8WW12 178 aaKnown RBP9.95□□□□□ -0.82
FANCA-220ENST00000566409 KRTAP4-5Q9BYR2 181 aa9.95□□□□□ -0.82
FANCA-220ENST00000566409 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 ZFP69Q49AA0 526 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 Q86TA4 180 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 KCNRGQ8N5I3 272 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 PTH2Q96A98 100 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
FANCA-220ENST00000566409 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
FANCA-220ENST00000566409 HIST1H2BAQ96A08 127 aa9.93□□□□□ -0.82
FANCA-220ENST00000566409 ZC2HC1AQ96GY0 325 aa9.93□□□□□ -0.82
FANCA-220ENST00000566409 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
FANCA-220ENST00000566409 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms