RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 BAGE2Q86Y30 109 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 EIF4E3Q8N5X7 224 aaKnown RBP5.83□□□□□ -1.48
CDH13-208ENST00000566333 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 EIF5A2Q9GZV4 153 aaKnown RBP5.83□□□□□ -1.48
CDH13-208ENST00000566333 MED9Q9NWA0 146 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 NAGKQ9UJ70 344 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 VPS13DQ5THJ4 4388 aa5.83□□□□□ -1.48
CDH13-208ENST00000566333 IGKV3D-20A0A0C4DH25 116 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 IGHV3-16A0A0C4DH30 117 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 TMEM189A5PLL7 270 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 CBY3A6NI87 242 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 K7EN84 100 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 GNG4P50150 75 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 EMP1P54849 157 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 TCL1AP56279 114 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 IBA57Q5T440 356 aaKnown RBP5.82□□□□□ -1.48
CDH13-208ENST00000566333 FAM162BQ5T6X4 162 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 FAM222AQ5U5X8 452 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 ZNF493Q6ZR52 646 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 LINC00612Q8N6U2 182 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 SMIM12Q96EX1 92 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 LYSTQ99698 3801 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 PGPEP1Q9NXJ5 209 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 MDFICQ9P1T7 246 aa5.82□□□□□ -1.48
CDH13-208ENST00000566333 C19orf71A6NCJ1 209 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 LYRM9A8MSI8 78 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 NANOS2P60321 138 aaKnown RBP5.81□□□□□ -1.48
CDH13-208ENST00000566333 RAB14P61106 215 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 DAZ2Q13117 558 aaKnown RBP5.81□□□□□ -1.48
CDH13-208ENST00000566333 PRR27Q6MZM9 219 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 FAM159AQ6UWV7 190 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 SDF2L1Q9HCN8 221 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 GSN-AS1Q9NRJ2 163 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 SACSQ9NZJ4 4579 aa5.81□□□□□ -1.48
CDH13-208ENST00000566333 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 FABP5P3A8MUU1 101 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 KRBOX1C9JBD0 128 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 J3QL48 77 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 M0R036 132 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 GNRH2O43555 120 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
CDH13-208ENST00000566333 CEBPGP53567 150 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 RPL19P84098 196 aaKnown RBP5.8□□□□□ -1.48
CDH13-208ENST00000566333 ZNF415Q09FC8 603 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 C12orf74Q32Q52 190 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 Q6ZTC4 211 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 C11orf45Q8TAV5 145 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 MUC7Q8TAX7 377 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 C9orf85Q96MD7 179 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 SMIM7Q9BQ49 75 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 SMDT1Q9H4I9 107 aa5.8□□□□□ -1.48
CDH13-208ENST00000566333 NOP10Q9NPE3 64 aaKnown RBP5.8□□□□□ -1.48
CDH13-208ENST00000566333 TIMM8BQ9Y5J9 83 aaPredicted RBP5.8□□□□□ -1.48
CDH13-208ENST00000566333 TEX48A0A1B0GUV7 120 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 CXorf65A6NEN9 183 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 B4DEV8 164 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 SPINK4O60575 86 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 SPART-AS1P0CW21 52 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 MGST1P10620 155 aaKnown RBP5.79□□□□□ -1.48
CDH13-208ENST00000566333 OR5I1Q13606 314 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 PEA15Q15121 130 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 DNLZQ5SXM8 178 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 Q6ZTI0 123 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 LINC01551Q86U37 167 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 OCC1Q8TAD7 63 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 KCNS1Q96KK3 526 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 LY96Q9Y6Y9 160 aa5.79□□□□□ -1.48
CDH13-208ENST00000566333 KMT2CQ8NEZ4 4911 aaKnown RBP5.79□□□□□ -1.48
CDH13-208ENST00000566333 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 ZNF727A8MUV8 499 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 SNURFLB1AK76 121 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 H3BVH4 76 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 ORM1P02763 201 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 CXCL1P09341 107 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 SFTA3P0C7M3 94 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 ADCYAP1P18509 176 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 SCRT2Q9NQ03 307 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 MRPL16Q9NX20 251 aaKnown RBP5.78□□□□□ -1.48
CDH13-208ENST00000566333 DNAH6Q9C0G6 4158 aa5.78□□□□□ -1.48
CDH13-208ENST00000566333 TMSB15BA0A087X1C1 80 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 GRIFINA4D1Z8 144 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 DEFB130BP0DP73 79 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 DEFB130AP0DP74 79 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 ASIPP42127 132 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 DAD1P61803 113 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 LGALS9BQ3B8N2 356 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 FAM74A3Q4VXF1 159 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 ZFAND6Q6FIF0 208 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 COMMD7Q86VX2 200 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 PHLDA1Q8WV24 401 aaPredicted RBP5.77□□□□□ -1.49
CDH13-208ENST00000566333 C18orf15Q96N68 181 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 RNASE7Q9H1E1 156 aaKnown RBP5.77□□□□□ -1.49
CDH13-208ENST00000566333 IL36BQ9NZH7 164 aa5.77□□□□□ -1.49
CDH13-208ENST00000566333 TRGV1A0A0A0MS02 117 aa5.76□□□□□ -1.49
CDH13-208ENST00000566333 GAGE12BA1L429 117 aa5.76□□□□□ -1.49
CDH13-208ENST00000566333 M0R2P5 195 aa5.76□□□□□ -1.49
CDH13-208ENST00000566333 SNAI2O43623 268 aa5.76□□□□□ -1.49
CDH13-208ENST00000566333 GAGE7O76087 117 aa5.76□□□□□ -1.49
CDH13-208ENST00000566333 NXPH4O95158 308 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms