RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC01043-201ENST00000565936 Q6ZWC4 215 aa5.08□□□□□ -1.6
LINC01043-201ENST00000565936 APRG1Q8IVJ8 170 aa5.08□□□□□ -1.6
LINC01043-201ENST00000565936 GATD1Q8NB37 220 aa5.08□□□□□ -1.6
LINC01043-201ENST00000565936 ODF3BA8MYP8 253 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 C11orf52Q96A22 123 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 IGKV2D-24A0A075B6R9 120 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BKO60814 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BJP06899 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BOP23527 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BBP33778 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BDP58876 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BCP62807 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST2H2BEQ16778 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BHQ93079 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BNQ99877 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H2BMQ99879 126 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 IGHG4P01861 327 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 ORAOV1Q8WV07 137 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 LINC00574Q9H8X3 128 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 SPTAN1Q13813 2472 aaKnown RBP5.07□□□□□ -1.6
LINC01043-201ENST00000565936 TMEM213A2RRL7 107 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 SMKR1H3BMG3 65 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 LTAP01374 205 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 DAZ2Q13117 558 aaKnown RBP5.07□□□□□ -1.6
LINC01043-201ENST00000565936 C11orf71Q6IPW1 123 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 DAZ4Q86SG3 579 aaKnown RBP5.07□□□□□ -1.6
LINC01043-201ENST00000565936 SIGMAR1Q99720 223 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 AGPAT4-IT1Q9H0P7 198 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 DAZ3Q9NR90 486 aaKnown RBP5.07□□□□□ -1.6
LINC01043-201ENST00000565936 BUB3O43684 328 aa5.07□□□□□ -1.6
LINC01043-201ENST00000565936 IGLV2-23P01705 113 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 NPC2P61916 151 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 LURAP1LQ8IV03 231 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 A0A0J9YY99 117 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 A8MWP6 167 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 LY6G6DO95868 133 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 DYNAPQ8N1N2 210 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 MBD6Q96DN6 1003 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 EDA2RQ9HAV5 297 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 SIGLEC8Q9NYZ4 499 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 LAMTOR3Q9UHA4 124 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 HIST1H4AP62805 103 aaKnown RBP5.06□□□□□ -1.6
LINC01043-201ENST00000565936 ATP6V0E2Q8NHE4 81 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 ZC2HC1AQ96GY0 325 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 CHAC1Q9BUX1 264 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 NUP210LQ5VU65 1888 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 CADP27708 2225 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 GAGE2EQ4V326 116 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 GAGE2DQ9UEU5 116 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 COL4A3Q01955 1670 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 IGKV1OR2-108A0A075B7D4 117 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 SMIM27A0A1W2PRY6 76 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 F8W735 103 aaPredicted RBP5.06□□□□□ -1.6
LINC01043-201ENST00000565936 K7EQD1 137 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 LGALS9O00182 355 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 IGF1P05019 195 aa5.06□□□□□ -1.6
LINC01043-201ENST00000565936 MRPL51Q4U2R6 128 aaKnown RBP5.06□□□□□ -1.6
LINC01043-201ENST00000565936 MUC22E2RYF6 1773 aaPredicted RBP5.06□□□□□ -1.6
LINC01043-201ENST00000565936 KMT2EQ8IZD2 1858 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 FAM208BQ5VWN6 2430 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SYS1-DBNDD2H3BUS1 97 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SPRY2O43597 315 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SMIM2Q9BVW6 85 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 Q0VG73 95 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 CFHR4Q92496 578 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 WISP2O76076 250 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 CXCL1P09341 107 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 GYPEP15421 78 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 RITA1Q96K30 269 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 IGHV3-38A0A0C4DH36 116 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SMIM9A6NGZ8 99 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 C10orf142B7Z368 130 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 F6UB75 175 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 IGKV1-17P01599 117 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 ESDP10768 282 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 PRSS29PA6NIE9 313 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 MSMPQ1L6U9 139 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 SPANXA1Q9NS26 97 aa5.05□□□□□ -1.6
LINC01043-201ENST00000565936 COL5A1P20908 1838 aaPredicted RBP5.05□□□□□ -1.6
LINC01043-201ENST00000565936 A0A087X0K7 114 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 A0A096LPF7 62 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 ATRAIDQ6UW56 229 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 SPATA25Q9BR10 227 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 PTPRQQ9UMZ3 2332 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 HILS1P60008 231 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 ZNF479Q96JC4 524 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 TMEM126AQ9H061 195 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 DYSFO75923 2080 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 CRLF1O75462 422 aa5.04□□□□□ -1.6
LINC01043-201ENST00000565936 ZFAND6Q6FIF0 208 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms