RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ZNF674Q2M3X9 581 aa18.63■□□□□ 0.57
NME3-208ENST00000565379 TEX48A0A1B0GUV7 120 aa18.62■□□□□ 0.57
NME3-208ENST00000565379 FAM74A3Q4VXF1 159 aa18.62■□□□□ 0.57
NME3-208ENST00000565379 RNASE8Q8TDE3 154 aaKnown RBP18.62■□□□□ 0.57
NME3-208ENST00000565379 TRGV11A0A075B6L2 103 aa18.61■□□□□ 0.57
NME3-208ENST00000565379 CEBPGP53567 150 aa18.61■□□□□ 0.57
NME3-208ENST00000565379 IBA57Q5T440 356 aaKnown RBP18.61■□□□□ 0.57
NME3-208ENST00000565379 SDF2L1Q9HCN8 221 aa18.61■□□□□ 0.57
NME3-208ENST00000565379 LY96Q9Y6Y9 160 aa18.61■□□□□ 0.57
NME3-208ENST00000565379 AZU1P20160 251 aa18.6■□□□□ 0.57
NME3-208ENST00000565379 MUC21Q5SSG8 566 aa18.6■□□□□ 0.57
NME3-208ENST00000565379 Q6ZQT7 251 aa18.6■□□□□ 0.57
NME3-208ENST00000565379 NHLRC2Q8NBF2 726 aa18.6■□□□□ 0.57
NME3-208ENST00000565379 NAGKQ9UJ70 344 aa18.6■□□□□ 0.57
NME3-208ENST00000565379 TRBV20OR9-2A0A075B6H5 130 aa18.59■□□□□ 0.57
NME3-208ENST00000565379 IGLV2-8P01709 118 aa18.59■□□□□ 0.57
NME3-208ENST00000565379 CRIP1P50238 77 aa18.59■□□□□ 0.57
NME3-208ENST00000565379 SMIM7Q9BQ49 75 aa18.59■□□□□ 0.57
NME3-208ENST00000565379 ZNF727A8MUV8 499 aa18.58■□□□□ 0.56
NME3-208ENST00000565379 SH2D1AO60880 128 aa18.58■□□□□ 0.56
NME3-208ENST00000565379 SRSF3P84103 164 aaKnown RBP18.58■□□□□ 0.56
NME3-208ENST00000565379 UQCC3Q6UW78 93 aa18.58■□□□□ 0.56
NME3-208ENST00000565379 BIRC6Q9NR09 4857 aa18.58■□□□□ 0.56
NME3-208ENST00000565379 SNURFLB1AK76 121 aa18.57■□□□□ 0.56
NME3-208ENST00000565379 DEFB4AO15263 64 aa18.57■□□□□ 0.56
NME3-208ENST00000565379 PRM2P04554 102 aa18.57■□□□□ 0.56
NME3-208ENST00000565379 SPART-AS1P0CW21 52 aa18.57■□□□□ 0.56
NME3-208ENST00000565379 MGST1P10620 155 aaKnown RBP18.57■□□□□ 0.56
NME3-208ENST00000565379 TP53TG3Q9ULZ0 132 aa18.57■□□□□ 0.56
NME3-208ENST00000565379 TIMM8BQ9Y5J9 83 aaPredicted RBP18.57■□□□□ 0.56
NME3-208ENST00000565379 LYRM9A8MSI8 78 aa18.56■□□□□ 0.56
NME3-208ENST00000565379 C9JQL5 133 aa18.56■□□□□ 0.56
NME3-208ENST00000565379 EMP1P54849 157 aa18.56■□□□□ 0.56
NME3-208ENST00000565379 ZNF415Q09FC8 603 aa18.56■□□□□ 0.56
NME3-208ENST00000565379 DAZAP1Q96EP5 407 aaKnown RBP18.56■□□□□ 0.56
NME3-208ENST00000565379 PLAC8L1A1L4L8 177 aa18.55■□□□□ 0.56
NME3-208ENST00000565379 ORM1P02763 201 aa18.55■□□□□ 0.56
NME3-208ENST00000565379 LINC01559Q495D7 138 aa18.55■□□□□ 0.56
NME3-208ENST00000565379 SOHLH1Q5JUK2 328 aa18.55■□□□□ 0.56
NME3-208ENST00000565379 C11orf72Q8NBR9 251 aa18.55■□□□□ 0.56
NME3-208ENST00000565379 CXorf65A6NEN9 183 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 TCL1AP56279 114 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 DAZ2Q13117 558 aaKnown RBP18.54■□□□□ 0.56
NME3-208ENST00000565379 PRR27Q6MZM9 219 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 OCC1Q8TAD7 63 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 C11orf45Q8TAV5 145 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 C11orf21Q9P2W6 132 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 DKK2Q9UBU2 259 aa18.54■□□□□ 0.56
NME3-208ENST00000565379 LINC00862A6NCI5 91 aa18.53■□□□□ 0.56
NME3-208ENST00000565379 B4DEV8 164 aa18.53■□□□□ 0.56
NME3-208ENST00000565379 TYMSP04818 313 aa18.53■□□□□ 0.56
NME3-208ENST00000565379 IGKV3D-20A0A0C4DH25 116 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 PGPEP1LA6NFU8 196 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 KRBOX1C9JBD0 128 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 TMEM241Q24JQ0 296 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 FAM222AQ5U5X8 452 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 SPXQ9BT56 116 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 GSN-AS1Q9NRJ2 163 aa18.52■□□□□ 0.56
NME3-208ENST00000565379 IGHV3-16A0A0C4DH30 117 aa18.51■□□□□ 0.55
NME3-208ENST00000565379 GNRH2O43555 120 aa18.51■□□□□ 0.55
NME3-208ENST00000565379 DNLZQ5SXM8 178 aa18.51■□□□□ 0.55
NME3-208ENST00000565379 NAT8Q9UHE5 227 aa18.51■□□□□ 0.55
NME3-208ENST00000565379 C19orf71A6NCJ1 209 aa18.5■□□□□ 0.55
NME3-208ENST00000565379 CXCL1P09341 107 aa18.5■□□□□ 0.55
NME3-208ENST00000565379 NOP10Q9NPE3 64 aaKnown RBP18.5■□□□□ 0.55
NME3-208ENST00000565379 P01737 135 aa18.49■□□□□ 0.55
NME3-208ENST00000565379 ASIPP42127 132 aa18.49■□□□□ 0.55
NME3-208ENST00000565379 OR5I1Q13606 314 aa18.49■□□□□ 0.55
NME3-208ENST00000565379 COMMD7Q86VX2 200 aa18.49■□□□□ 0.55
NME3-208ENST00000565379 MDFICQ9P1T7 246 aa18.49■□□□□ 0.55
NME3-208ENST00000565379 M0R036 132 aa18.48■□□□□ 0.55
NME3-208ENST00000565379 SFTA3P0C7M3 94 aa18.48■□□□□ 0.55
NME3-208ENST00000565379 S100A4P26447 101 aaKnown RBP18.48■□□□□ 0.55
NME3-208ENST00000565379 RPS20P60866 119 aaKnown RBP18.48■□□□□ 0.55
NME3-208ENST00000565379 LGALS9BQ3B8N2 356 aa18.48■□□□□ 0.55
NME3-208ENST00000565379 LINC01551Q86U37 167 aa18.48■□□□□ 0.55
NME3-208ENST00000565379 XKRY2A2RUG3 117 aa18.47■□□□□ 0.55
NME3-208ENST00000565379 K7EN84 100 aa18.47■□□□□ 0.55
NME3-208ENST00000565379 CELA1Q9UNI1 258 aa18.47■□□□□ 0.55
NME3-208ENST00000565379 SPINK4O60575 86 aa18.46■□□□□ 0.55
NME3-208ENST00000565379 FAM231DQ6ZW35 169 aa18.46■□□□□ 0.55
NME3-208ENST00000565379 DAD1P61803 113 aa18.45■□□□□ 0.54
NME3-208ENST00000565379 LINC00612Q8N6U2 182 aa18.45■□□□□ 0.54
NME3-208ENST00000565379 C9orf85Q96MD7 179 aa18.45■□□□□ 0.54
NME3-208ENST00000565379 IL36BQ9NZH7 164 aa18.45■□□□□ 0.54
NME3-208ENST00000565379 M0R2P5 195 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 MED14OSP0DP75 135 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 C12orf74Q32Q52 190 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 NUDT10Q8NFP7 164 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 PTH2Q96A98 100 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 NUDT11Q96G61 164 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 NDUFAF3Q9BU61 184 aa18.44■□□□□ 0.54
NME3-208ENST00000565379 NANOS2P60321 138 aaKnown RBP18.43■□□□□ 0.54
NME3-208ENST00000565379 RPL23P62829 140 aaKnown RBP18.43■□□□□ 0.54
NME3-208ENST00000565379 CEMP1Q6PRD7 247 aaPredicted RBP18.43■□□□□ 0.54
NME3-208ENST00000565379 OR2D3Q8NGH3 330 aa18.43■□□□□ 0.54
NME3-208ENST00000565379 LINC00476Q8WZB0 136 aa18.43■□□□□ 0.54
NME3-208ENST00000565379 C18orf15Q96N68 181 aa18.43■□□□□ 0.54
NME3-208ENST00000565379 VPS13DQ5THJ4 4388 aa18.42■□□□□ 0.54
NME3-208ENST00000565379 TMSB15BA0A087X1C1 80 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms