RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZNF25P17030 456 aaPredicted RBP1.17□□□□□ -2.22
UBR1-205ENST00000564540 ADCYAP1P18509 176 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 GUCA1AP43080 201 aaPredicted RBP1.17□□□□□ -2.22
UBR1-205ENST00000564540 SPRNQ5BIV9 151 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 MEIG1Q5JSS6 88 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 SLC25A26Q70HW3 274 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 SNX29P2Q8IUI4 249 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 TCTEX1D1Q8N7M0 179 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 ATP6V0E2Q8NHE4 81 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 ZNF563Q8TA94 476 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 CCDC167Q9P0B6 97 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 ZFP30Q9Y2G7 519 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 NOP16Q9Y3C1 178 aaKnown RBP1.17□□□□□ -2.22
UBR1-205ENST00000564540 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.17□□□□□ -2.22
UBR1-205ENST00000564540 MYOFQ9NZM1 2061 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 ADGRB1O14514 1584 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 CR1P17927 2039 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 KIDINS220Q9ULH0 1771 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 ERBINQ96RT1 1412 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 MUC4Q99102 2169 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 SPAARA0A1B0GVQ0 90 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 A0A1W2PRS3 328 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 BBIP1A8MTZ0 92 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 MIF4GDA9UHW6 222 aaKnown RBP1.16□□□□□ -2.22
UBR1-205ENST00000564540 INE1O15225 51 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 KLF7O75840 302 aaPredicted RBP1.16□□□□□ -2.22
UBR1-205ENST00000564540 IFNGP01579 166 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 MPV17LQ2QL34 196 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 CSAG1Q6PB30 78 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 SCIMPQ6UWF3 145 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 UNQ6190/PRO20217Q6UXQ8 127 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 IDO2Q6ZQW0 420 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 KCNRGQ8N5I3 272 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.16□□□□□ -2.22
UBR1-205ENST00000564540 TMEM203Q969S6 136 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 LIMD2Q9BT23 127 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 MED9Q9NWA0 146 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 KIF13AQ9H1H9 1805 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 SDK1Q7Z5N4 2213 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 TRPM7Q96QT4 1865 aa1.16□□□□□ -2.22
UBR1-205ENST00000564540 MYOM3Q5VTT5 1437 aa1.15□□□□□ -2.22
UBR1-205ENST00000564540 KIAA1549LQ6ZVL6 1849 aa1.15□□□□□ -2.22
UBR1-205ENST00000564540 TRAV12-2A0A075B6T6 113 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 A0A0J9YY99 117 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 CCDC179H3BU77 68 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 J3QLW9 94 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 APODP05090 189 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 PRB4P10163 310 aaPredicted RBP1.15□□□□□ -2.23
UBR1-205ENST00000564540 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
UBR1-205ENST00000564540 S100A1P23297 94 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 RHOHQ15669 191 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 OCIAD2Q56VL3 154 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 PSMG3Q9BT73 122 aaPredicted RBP1.15□□□□□ -2.23
UBR1-205ENST00000564540 SCN3BQ9NY72 215 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 SNURFQ9Y675 71 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 UHRF1BP1LA0JNW5 1464 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 MBD5Q9P267 1494 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 ADGRB2O60241 1585 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 EML5Q05BV3 1969 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 SIP14410 1827 aa1.15□□□□□ -2.23
UBR1-205ENST00000564540 SMG6Q86US8 1419 aaKnown RBP1.15□□□□□ -2.23
UBR1-205ENST00000564540 GEMIN2O14893 280 aaKnown RBP1.14□□□□□ -2.23
UBR1-205ENST00000564540 DNAL4O96015 105 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 PPYP01298 95 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 IGLV3-1P01715 115 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 IGKCP01834 107 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 IL7P13232 177 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 FGF7P21781 194 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 S100PP25815 95 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 C3orf62Q6ZUJ4 267 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 VSTM2AQ8TAG5 236 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 DYNLRB2Q8TF09 96 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 SNRNP25Q9BV90 132 aaKnown RBP1.14□□□□□ -2.23
UBR1-205ENST00000564540 CYSTM1Q9H1C7 97 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 TAS2R8Q9NYW2 309 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 GNG8Q9UK08 70 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 ALPK3Q96L96 1907 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 SPEF2Q9C093 1822 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 TNRC6BQ9UPQ9 1833 aaKnown RBP1.14□□□□□ -2.23
UBR1-205ENST00000564540 NALCNQ8IZF0 1738 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 EXPH5Q8NEV8 1989 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 ANK1P16157 1881 aa1.14□□□□□ -2.23
UBR1-205ENST00000564540 CASZ1Q86V15 1759 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 MYH7P12883 1935 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 BCL9LQ86UU0 1499 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 TRAV17A0A0B4J275 112 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 F6UZH7 168 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 CORTO00230 105 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 TFF1P04155 84 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 WHAMMP3Q1A5X7 153 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 LYPD5Q6UWN5 251 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 LINC00322Q6ZN03 302 aaPredicted RBP1.13□□□□□ -2.23
UBR1-205ENST00000564540 PP6455Q8WZ26 134 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 PDCD10Q9BUL8 212 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 SEC11CQ9BY50 192 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 AGPAT4-IT1Q9H0P7 198 aa1.13□□□□□ -2.23
UBR1-205ENST00000564540 WFDC10AQ9H1F0 79 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms