RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RPH3ALQ9UNE2 315 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 LY96Q9Y6Y9 160 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 FBLL1A6NHQ2 334 aaKnown RBP10.24□□□□□ -0.77
SPG7-210ENST00000564409 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 C5orf17Q8NAS9 161 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 SUN5Q8TC36 379 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 AQP10Q96PS8 301 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 ALG5Q9Y673 324 aa10.24□□□□□ -0.77
SPG7-210ENST00000564409 ABCA13Q86UQ4 5058 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 PTTG1O95997 202 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 GYPEP15421 78 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 EVI2AP22794 236 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 TIRAPP58753 221 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 ERVFC1-1P60608 527 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 TMEM167BQ9NRX6 74 aa10.23□□□□□ -0.77
SPG7-210ENST00000564409 TAAR5O14804 337 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 GNRH2O43555 120 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 TYMSP04818 313 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 C10orf126Q8N4M7 172 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 TVP23CQ96ET8 276 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 MED28Q9H204 178 aa10.22□□□□□ -0.77
SPG7-210ENST00000564409 TRAV8-1A0A0A6YYK1 113 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 CXorf1O96002 111 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 TCRAP04437 139 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 DNAH10OSP0CZ25 163 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 GCHFRP30047 84 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 Q8N1X5 172 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 HSD17B11Q8NBQ5 300 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 KRTAP4-5Q9BYR2 181 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.77
SPG7-210ENST00000564409 F6UZH7 168 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
SPG7-210ENST00000564409 EIF3GO75821 320 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPG7-210ENST00000564409 ATP6V0CP27449 155 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 GNG5P63218 68 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 HSPG2P98160 4391 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 ZFP69Q49AA0 526 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 INO80EQ8NBZ0 244 aaPredicted RBP10.2□□□□□ -0.78
SPG7-210ENST00000564409 PTH2Q96A98 100 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
SPG7-210ENST00000564409 MSRB1Q9NZV6 116 aa10.2□□□□□ -0.78
SPG7-210ENST00000564409 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
SPG7-210ENST00000564409 GATA1P15976 413 aaPredicted RBP10.19□□□□□ -0.78
SPG7-210ENST00000564409 SAPCD1Q5SSQ6 148 aa10.19□□□□□ -0.78
SPG7-210ENST00000564409 EPDR1Q9UM22 224 aa10.19□□□□□ -0.78
SPG7-210ENST00000564409 BORCS7-ASMTA0A0B4J1R7 106 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 A0A1W2PRE2 83 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 GIPP09681 153 aaPredicted RBP10.18□□□□□ -0.78
SPG7-210ENST00000564409 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
SPG7-210ENST00000564409 FLI1Q01543 452 aaPredicted RBP10.18□□□□□ -0.78
SPG7-210ENST00000564409 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 SMUG1Q53HV7 270 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 WFDC10BQ8IUB3 73 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 PRADC1Q9BSG0 188 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 PSG8Q9UQ74 426 aa10.18□□□□□ -0.78
SPG7-210ENST00000564409 TRBV6-4A0A1B0GX49 114 aa10.17□□□□□ -0.78
SPG7-210ENST00000564409 GCGP01275 180 aa10.17□□□□□ -0.78
SPG7-210ENST00000564409 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
SPG7-210ENST00000564409 NHLRC2Q8NBF2 726 aa10.17□□□□□ -0.78
SPG7-210ENST00000564409 NKX6-2Q9C056 277 aaPredicted RBP10.17□□□□□ -0.78
SPG7-210ENST00000564409 SH3BGRL3Q9H299 93 aa10.17□□□□□ -0.78
SPG7-210ENST00000564409 A0A087WTM6 91 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 RS1O15537 224 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 IGLV2-11P01706 119 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 CRYGDP07320 174 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 PPT1P50897 306 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
SPG7-210ENST00000564409 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 SCRT2Q9NQ03 307 aa10.16□□□□□ -0.78
SPG7-210ENST00000564409 TRAV8-6A0A0B4J262 113 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 GGTLC3B5MD39 225 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 RHOHQ15669 191 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 LINC01556Q5JQF7 62 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 LRP1BQ9NZR2 4599 aa10.15□□□□□ -0.78
SPG7-210ENST00000564409 CTXND1A0A1B0GTU2 59 aa10.14□□□□□ -0.79
SPG7-210ENST00000564409 MGST1P10620 155 aaKnown RBP10.14□□□□□ -0.79
SPG7-210ENST00000564409 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
SPG7-210ENST00000564409 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
SPG7-210ENST00000564409 FABP5P3A8MUU1 101 aa10.13□□□□□ -0.79
SPG7-210ENST00000564409 ZNF506Q5JVG8 444 aa10.13□□□□□ -0.79
SPG7-210ENST00000564409 ZFP2Q6ZN57 461 aa10.13□□□□□ -0.79
SPG7-210ENST00000564409 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
SPG7-210ENST00000564409 A8MWV9 139 aa10.12□□□□□ -0.79
SPG7-210ENST00000564409 IFNA7P01567 189 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms