RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PRO0255Q9UI72 69 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 IGLV2-11P01706 119 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 RASL10AQ92737 203 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 ZNF479Q96JC4 524 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 PSG8Q9UQ74 426 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 HHLA3Q9XRX5 114 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 DNAH11Q96DT5 4516 aa13.76□□□□□ -0.21
SHCBP1-203ENST00000564272 TRGV4A0A0C4DH28 118 aa13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 CTXND1A0A1B0GTU2 59 aa13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 K7EQM0 130 aa13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 ZNF80P51504 273 aaPredicted RBP13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 DYNC1H1Q14204 4646 aaKnown RBP13.75□□□□□ -0.21
SHCBP1-203ENST00000564272 FGF8P55075 233 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 SLAQ13239 276 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 TTC32Q5I0X7 151 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 PRNTQ86SH4 94 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 CYB561D1Q8N8Q1 229 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 CYTL1Q9NRR1 136 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 C11orf21Q9P2W6 132 aa13.74□□□□□ -0.21
SHCBP1-203ENST00000564272 M0R2P5 195 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 GCGP01275 180 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 UBE2G2P60604 165 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 AKR1C8PQ5T2L2 129 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 TMEM75Q8N9X5 138 aa13.73□□□□□ -0.21
SHCBP1-203ENST00000564272 TRAV4A0A0B4J268 109 aa13.72□□□□□ -0.21
SHCBP1-203ENST00000564272 A0A1W2PRE2 83 aa13.72□□□□□ -0.21
SHCBP1-203ENST00000564272 TAAR5O14804 337 aa13.72□□□□□ -0.21
SHCBP1-203ENST00000564272 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
SHCBP1-203ENST00000564272 TRAV34A0A0B4J273 112 aa13.71□□□□□ -0.21
SHCBP1-203ENST00000564272 MRPL23Q16540 153 aaKnown RBP13.71□□□□□ -0.21
SHCBP1-203ENST00000564272 ZFP69Q49AA0 526 aa13.71□□□□□ -0.21
SHCBP1-203ENST00000564272 LINC00479Q96M42 142 aa13.71□□□□□ -0.21
SHCBP1-203ENST00000564272 A0A1W2PPQ1 181 aa13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 NXPH4O95158 308 aa13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 IFNA7P01567 189 aa13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 PFN1P07737 140 aaKnown RBP13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 SMUG1Q53HV7 270 aa13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 OR4C5Q8NGB2 326 aa13.7□□□□□ -0.22
SHCBP1-203ENST00000564272 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
SHCBP1-203ENST00000564272 K7EQD1 137 aa13.69□□□□□ -0.22
SHCBP1-203ENST00000564272 GYPEP15421 78 aa13.69□□□□□ -0.22
SHCBP1-203ENST00000564272 LYPD5Q6UWN5 251 aa13.69□□□□□ -0.22
SHCBP1-203ENST00000564272 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
SHCBP1-203ENST00000564272 FAM74A7A6NL05 159 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 C9JCJ5 164 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 PEX7O00628 323 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 SIVA1O15304 175 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 MED14OSP0DP75 135 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 SRIP30626 198 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 PCNPQ8WW12 178 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 ARL2-SNX15V9GYD0 113 aa13.68□□□□□ -0.22
SHCBP1-203ENST00000564272 FBLL1A6NHQ2 334 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-203ENST00000564272 SAPCD1Q5SSQ6 148 aa13.67□□□□□ -0.22
SHCBP1-203ENST00000564272 Q86TA4 180 aa13.67□□□□□ -0.22
SHCBP1-203ENST00000564272 KCNRGQ8N5I3 272 aa13.67□□□□□ -0.22
SHCBP1-203ENST00000564272 OR11H4Q8NGC9 324 aa13.67□□□□□ -0.22
SHCBP1-203ENST00000564272 LOC100131303A0A0U1RQF7 123 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 ORM1P02763 201 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 FHITP49789 147 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 LINC00315P59091 139 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 ZNF345Q14585 488 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 C9orf85Q96MD7 179 aa13.66□□□□□ -0.22
SHCBP1-203ENST00000564272 PPT1P50897 306 aa13.65□□□□□ -0.22
SHCBP1-203ENST00000564272 ZNF876PQ49A33 203 aa13.65□□□□□ -0.22
SHCBP1-203ENST00000564272 DPPA3Q6W0C5 159 aa13.65□□□□□ -0.22
SHCBP1-203ENST00000564272 GATA1P15976 413 aaPredicted RBP13.64□□□□□ -0.23
SHCBP1-203ENST00000564272 NKX6-2Q9C056 277 aaPredicted RBP13.64□□□□□ -0.23
SHCBP1-203ENST00000564272 IGKV3D-20A0A0C4DH25 116 aa13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 RS1O15537 224 aa13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 RNASE3P12724 160 aaKnown RBP13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 ZNF506Q5JVG8 444 aa13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 CFAP126Q5VTH2 177 aa13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
SHCBP1-203ENST00000564272 PGPEP1LA6NFU8 196 aa13.62□□□□□ -0.23
SHCBP1-203ENST00000564272 C16orf90A8MZG2 172 aa13.62□□□□□ -0.23
SHCBP1-203ENST00000564272 WFDC10BQ8IUB3 73 aa13.62□□□□□ -0.23
SHCBP1-203ENST00000564272 TXNDC17Q9BRA2 123 aa13.62□□□□□ -0.23
SHCBP1-203ENST00000564272 IGHV3-73A0A0B4J1V6 119 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 HMSDA8MTL9 139 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 BCL2L11O43521 198 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 STOML3Q8TAV4 291 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 ZC2HC1AQ96GY0 325 aa13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 ZNF471Q9BX82 626 aaPredicted RBP13.61□□□□□ -0.23
SHCBP1-203ENST00000564272 SEC11BP0C7V7 166 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 RYR1P21817 5038 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 Q6ZRN7 208 aaPredicted RBP13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 SLC25A29Q8N8R3 303 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
SHCBP1-203ENST00000564272 A0A0D9SG52 128 aa13.59□□□□□ -0.23
SHCBP1-203ENST00000564272 A0A1B0GV50 99 aa13.59□□□□□ -0.23
SHCBP1-203ENST00000564272 KANTRA0A1W2PQU2 76 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms