RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 SMCO1Q147U7 214 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 EBLN2Q6P2I7 272 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 Q6ZSA8 131 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 Q6ZTI0 123 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 TMED4Q7Z7H5 227 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 COQ8AQ8NI60 647 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 RNASE11Q8TAA1 199 aaKnown RBP3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 NARS2Q96I59 477 aaKnown RBP3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 PBDC1Q9BVG4 233 aa3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 TIMM8BQ9Y5J9 83 aaPredicted RBP3.68□□□□□ -1.82
HERPUD1-208ENST00000563911 ANKRD65E5RJM6 399 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 H3BNG1 76 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 CORTO00230 105 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 CCNKO75909 580 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 ATP6V1G2O95670 118 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 OXTP01178 125 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 G0S2P27469 103 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 ASIPP42127 132 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 SUB1P53999 127 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 AQP4P55087 323 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 TAS2R60P59551 318 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 SUPT4H1P63272 117 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 IDNKQ5T6J7 187 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 SPATA31B1PQ5VZV4 182 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 WFDC10BQ8IUB3 73 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 CMTM1Q8IZ96 169 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 MITD1Q8WV92 249 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 RPRMQ9NS64 109 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 SCN3BQ9NY72 215 aa3.67□□□□□ -1.82
HERPUD1-208ENST00000563911 F8W036 122 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 OR4E1P0C645 316 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 STAG3L2P0CL84 134 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 SLC25A4P12235 298 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 NKX2-5P52952 324 aaPredicted RBP3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 NMSQ5H8A3 153 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 Q6ZQT7 251 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 SMIM15Q7Z3B0 74 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 TMEM144Q7Z5S9 345 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 LHFPL1Q86WI0 220 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 BPIFCQ8NFQ6 507 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 OR5H2Q8NGV7 314 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 LRRC20Q8TCA0 184 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 RNASEH2CQ8TDP1 164 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 GPX8Q8TED1 209 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 TPRKBQ9Y3C4 175 aa3.66□□□□□ -1.82
HERPUD1-208ENST00000563911 MUC2Q02817 5179 aa3.65□□□□□ -1.82
HERPUD1-208ENST00000563911 A0A0A6YYH2 397 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 C3orf85A0A1B0GTC6 90 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 A6NJ64 397 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 GSTZ1O43708 216 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 PSMB9P28065 219 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 PIGPP57054 158 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 PLP1P60201 277 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 C1orf194Q5T5A4 169 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 SCXQ7RTU7 201 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 SELENOHQ8IZQ5 122 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 OR8I2Q8N0Y5 310 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 Q8N814 137 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 C11orf72Q8NBR9 251 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 OR8A1Q8NGG7 326 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 OR52E5Q8NH55 327 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 DTD1Q8TEA8 209 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 GLYATL2Q8WU03 294 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 TMEM263Q8WUH6 116 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 BORCS5Q969J3 196 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 SEC22CQ9BRL7 303 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 IFT46Q9NQC8 304 aa3.65□□□□□ -1.83
HERPUD1-208ENST00000563911 MRPS12O15235 138 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 ZNF324O75467 553 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 CDS2O95674 445 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 CRISP2P16562 243 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 CXCL3P19876 107 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 BCAP31P51572 246 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 AKR1C2P52895 323 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 TAS2R46P59540 309 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 HIST1H1AQ02539 215 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 RNASEKQ6P5S7 137 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 ZNF493Q6ZR52 646 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 OR10G9Q8NGN4 311 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 C12orf57Q99622 126 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 RTBDNQ9BSG5 229 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 KLF12Q9Y4X4 402 aa3.64□□□□□ -1.83
HERPUD1-208ENST00000563911 SMIM31A0A1B0GVY4 71 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 CEBPZOSA8MTT3 80 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 SNRPGP15A8MWD9 76 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 GOSR2O14653 212 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 IGHV3-53P01767 116 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 C1QBP02746 253 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 OR5AC1P0C628 307 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 PRSS3P35030 304 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 RPS10P46783 165 aaKnown RBP3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 CDC34P49427 236 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 RHOBP62745 196 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms