RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 FGF8P55075 233 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-203ENST00000563835 UBE2G2P60604 165 aa6.34□□□□□ -1.39
PTPN9-203ENST00000563835 TDRG1Q3Y452 100 aa6.34□□□□□ -1.39
PTPN9-203ENST00000563835 ACTR3CQ9C0K3 210 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-203ENST00000563835 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.39
PTPN9-203ENST00000563835 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 TRGV4A0A0C4DH28 118 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 LOC100131303A0A0U1RQF7 123 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 GCGP01275 180 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 MBP02144 154 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 SUMO1P63165 101 aaKnown RBP6.33□□□□□ -1.4
PTPN9-203ENST00000563835 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 ARL6IP6Q8N6S5 226 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 CYB561D1Q8N8Q1 229 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 RASL10AQ92737 203 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 LINC00479Q96M42 142 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 CYTL1Q9NRR1 136 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 TMEM167BQ9NRX6 74 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 PRO0255Q9UI72 69 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 PSG8Q9UQ74 426 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 HHLA3Q9XRX5 114 aa6.33□□□□□ -1.4
PTPN9-203ENST00000563835 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 NXPH4O95158 308 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-203ENST00000563835 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 SPXQ9BT56 116 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 NDFIP1Q9BT67 221 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 SDF2L1Q9HCN8 221 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 EPDR1Q9UM22 224 aa6.32□□□□□ -1.4
PTPN9-203ENST00000563835 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 A0A1B0GVG6 124 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 SERTM2A0A1B0GWG4 89 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 A0A1W2PRE2 83 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 MAP1LC3B2A6NCE7 125 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 C9JCJ5 164 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 K7EQD1 137 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 M0R2P5 195 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 GYPEP15421 78 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 FHITP49789 147 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 LINC00315P59091 139 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 AKR1C8PQ5T2L2 129 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 LYPD5Q6UWN5 251 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 DPPA3Q6W0C5 159 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 Q86TA4 180 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 OR11H4Q8NGC9 324 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 MAP1LC3BQ9GZQ8 125 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 ARL2-SNX15V9GYD0 113 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 LRP1BQ9NZR2 4599 aa6.31□□□□□ -1.4
PTPN9-203ENST00000563835 FAM74A7A6NL05 159 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 K7EQM0 130 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 PEX7O00628 323 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 SIVA1O15304 175 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 PFN1P07737 140 aaKnown RBP6.3□□□□□ -1.4
PTPN9-203ENST00000563835 MED14OSP0DP75 135 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 SRIP30626 198 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 ZFP69Q49AA0 526 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 SMUG1Q53HV7 270 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-203ENST00000563835 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 OR4C5Q8NGB2 326 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 KCNS1Q96KK3 526 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 C9orf85Q96MD7 179 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 HSPG2P98160 4391 aa6.3□□□□□ -1.4
PTPN9-203ENST00000563835 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 A0A1B0GV50 99 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 A0A1W2PPQ1 181 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 C16orf90A8MZG2 172 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 TAAR5O14804 337 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 IFNA7P01567 189 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 RNASE3P12724 160 aaKnown RBP6.29□□□□□ -1.4
PTPN9-203ENST00000563835 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
PTPN9-203ENST00000563835 ZNF506Q5JVG8 444 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 PCNPQ8WW12 178 aaKnown RBP6.29□□□□□ -1.4
PTPN9-203ENST00000563835 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
PTPN9-203ENST00000563835 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
PTPN9-203ENST00000563835 IGKV3D-20A0A0C4DH25 116 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 PGPEP1LA6NFU8 196 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-203ENST00000563835 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 SLAQ13239 276 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 ZNF345Q14585 488 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 ZNF876PQ49A33 203 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 CFAP126Q5VTH2 177 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 SPATA12Q7Z6I5 190 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 KCNRGQ8N5I3 272 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 ZC2HC1AQ96GY0 325 aa6.28□□□□□ -1.4
PTPN9-203ENST00000563835 hCG_2014768A0A024R1R8 64 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 FBLL1A6NHQ2 334 aaKnown RBP6.27□□□□□ -1.41
PTPN9-203ENST00000563835 H3BVH4 76 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 RS1O15537 224 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 BCL2L11O43521 198 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 ORM1P02763 201 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 FUSP35637 526 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTPN9-203ENST00000563835 CRIP1P50238 77 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 SLC25A29Q8N8R3 303 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 NHLRC2Q8NBF2 726 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms