RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 SERTAD4-AS1Q5TG53 156 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 PRNTQ86SH4 94 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 GTSCR1Q86UQ5 136 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 STHQ8IWL8 128 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 SVBPQ8N300 66 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 NEXN-AS1Q8NBZ9 246 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 OR4B1Q8NGF8 309 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 OCC1Q8TAD7 63 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 RNF183Q96D59 192 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 LINC00479Q96M42 142 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 SDF2L1Q9HCN8 221 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 ZNF492Q9P255 531 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
CDR2-203ENST00000563573 LENEPQ9Y5L5 61 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 NBEAL1Q6ZS30 2694 aa3.42□□□□□ -1.86
CDR2-203ENST00000563573 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 TRBV7-9A0A0J9YWB2 115 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 A0A0J9YX75 114 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 FABP5P3A8MUU1 101 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 PRAC2D3DTV9 90 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 PPP1R2P9O14990 202 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 LTAP01374 205 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 GPX1P07203 203 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 CT45A10P0DMU9 189 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 IGLL1P15814 213 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 TSPOP30536 169 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 LEPP41159 167 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 NUTF2P61970 127 aaKnown RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 RPL23P62829 140 aaKnown RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 HIST1H1AQ02539 215 aaPredicted RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 ERCC8Q13216 396 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 CENPWQ5EE01 88 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 FOXI2Q6ZQN5 318 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 TMEM183AQ8IXX5 376 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 VGLL1Q99990 258 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 FAM110AQ9BQ89 295 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 DERL1Q9BUN8 251 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 AGPAT4-IT1Q9H0P7 198 aa3.41□□□□□ -1.86
CDR2-203ENST00000563573 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 ZNF256Q9Y2P7 627 aaPredicted RBP3.41□□□□□ -1.86
CDR2-203ENST00000563573 IGLV5-52A0A0A0MRZ9 124 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 TRAV8-1A0A0A6YYK1 113 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 XKRY2A2RUG3 117 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 F6UB75 175 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 GATCO43716 136 aaKnown RBP3.4□□□□□ -1.87
CDR2-203ENST00000563573 GCGP01275 180 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 AMBPP02760 352 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 ZNF705DP0CH99 300 aaPredicted RBP3.4□□□□□ -1.87
CDR2-203ENST00000563573 ZNF705BP0CI00 300 aaPredicted RBP3.4□□□□□ -1.87
CDR2-203ENST00000563573 HLA-DRB4P13762 266 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 ADCYAP1P18509 176 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 RPL19P84098 196 aaKnown RBP3.4□□□□□ -1.87
CDR2-203ENST00000563573 RHEBQ15382 184 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 ACTL10Q5JWF8 245 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 IBA57Q5T440 356 aaKnown RBP3.4□□□□□ -1.87
CDR2-203ENST00000563573 PRR27Q6MZM9 219 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 Q86TA4 180 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 LINC01551Q86U37 167 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 APRG1Q8IVJ8 170 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 IGF2BP2-AS1Q96M15 143 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 ASCL2Q99929 193 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 RPS10P5Q9NQ39 176 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 TMEM242Q9NWH2 141 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 HLA-DRB4X5D2U9 266 aa3.4□□□□□ -1.87
CDR2-203ENST00000563573 A0A087WWC5 75 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 TRAV21A0A0B4J279 112 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 C7orf77A4D0Y5 90 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 KNCNA6PVL3 124 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 ZNF705GA8MUZ8 300 aaPredicted RBP3.39□□□□□ -1.87
CDR2-203ENST00000563573 H3BMM0 161 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 IGLV2-11P01706 119 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 P01737 135 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 ORM1P02763 201 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 CD7P09564 240 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 CRISP2P16562 243 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 S100PP25815 95 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 RNASE4P34096 147 aaKnown RBP3.39□□□□□ -1.87
CDR2-203ENST00000563573 CDKN1BP46527 198 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 RPS20P60866 119 aaKnown RBP3.39□□□□□ -1.87
CDR2-203ENST00000563573 OR5I1Q13606 314 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 FAM162BQ5T6X4 162 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 GDF5OSQ5U4N7 250 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
CDR2-203ENST00000563573 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 FAM159AQ6UWV7 190 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 FAM231DQ6ZW35 169 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 NHLRC2Q8NBF2 726 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
CDR2-203ENST00000563573 SFRP2Q96HF1 295 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms