RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 IQCF2Q8IXL9 164 aa9.69□□□□□ -0.86
SMPD3-204ENST00000563396 NDFIP1Q9BT67 221 aa9.69□□□□□ -0.86
SMPD3-204ENST00000563396 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
SMPD3-204ENST00000563396 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
SMPD3-204ENST00000563396 PAX4O43316 350 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 TNP2Q05952 138 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 NAGKQ9UJ70 344 aa9.68□□□□□ -0.86
SMPD3-204ENST00000563396 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 K7EQM0 130 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 TAAR5O14804 337 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 EPDR1Q9UM22 224 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
SMPD3-204ENST00000563396 M0R2P5 195 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 ARPC5O15511 151 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 ZNF80P51504 273 aaPredicted RBP9.66□□□□□ -0.86
SMPD3-204ENST00000563396 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
SMPD3-204ENST00000563396 FLI1Q01543 452 aaPredicted RBP9.66□□□□□ -0.86
SMPD3-204ENST00000563396 ZNF345Q14585 488 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 ZNF479Q96JC4 524 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
SMPD3-204ENST00000563396 GNRH2O43555 120 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 GCGP01275 180 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 PFN1P07737 140 aaKnown RBP9.65□□□□□ -0.86
SMPD3-204ENST00000563396 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
SMPD3-204ENST00000563396 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 C11orf21Q9P2W6 132 aa9.65□□□□□ -0.86
SMPD3-204ENST00000563396 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
SMPD3-204ENST00000563396 K7EQD1 137 aa9.64□□□□□ -0.87
SMPD3-204ENST00000563396 ORM1P02763 201 aa9.64□□□□□ -0.87
SMPD3-204ENST00000563396 ZFP69Q49AA0 526 aa9.64□□□□□ -0.87
SMPD3-204ENST00000563396 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
SMPD3-204ENST00000563396 FAM74A7A6NL05 159 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 SIVA1O15304 175 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 NXPH4O95158 308 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 AKR1C8PQ5T2L2 129 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 Q86TA4 180 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
SMPD3-204ENST00000563396 NKX6-2Q9C056 277 aaPredicted RBP9.63□□□□□ -0.87
SMPD3-204ENST00000563396 LRP1BQ9NZR2 4599 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 RYR1P21817 5038 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 MAP1LC3B2A6NCE7 125 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 C9JCJ5 164 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 PEX7O00628 323 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
SMPD3-204ENST00000563396 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 KCNRGQ8N5I3 272 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 PTH2Q96A98 100 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 MAP1LC3BQ9GZQ8 125 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
SMPD3-204ENST00000563396 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
SMPD3-204ENST00000563396 GYPEP15421 78 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
SMPD3-204ENST00000563396 SRIP30626 198 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 PPT1P50897 306 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 FGF8P55075 233 aaPredicted RBP9.61□□□□□ -0.87
SMPD3-204ENST00000563396 LINC00315P59091 139 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 TCEAL7Q9BRU2 100 aa9.61□□□□□ -0.87
SMPD3-204ENST00000563396 HMSDA8MTL9 139 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 SMLR1H3BR10 107 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 CIDEAO60543 219 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 UBE2G2P60604 165 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 PCNPQ8WW12 178 aaKnown RBP9.6□□□□□ -0.87
SMPD3-204ENST00000563396 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 TXNDC17Q9BRA2 123 aa9.6□□□□□ -0.87
SMPD3-204ENST00000563396 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 IGKV3D-20A0A0C4DH25 116 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 K7EP13 123 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 RS1O15537 224 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 IFNA7P01567 189 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 FHITP49789 147 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 TIRAPP58753 221 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 OR11H4Q8NGC9 324 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
SMPD3-204ENST00000563396 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
SMPD3-204ENST00000563396 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms