RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 IGLV2-8P01709 118 aa13.51□□□□□ -0.25
RAB40C-207ENST00000563109 CRIP1P50238 77 aa13.51□□□□□ -0.25
RAB40C-207ENST00000563109 FAM74A3Q4VXF1 159 aa13.51□□□□□ -0.25
RAB40C-207ENST00000563109 IBA57Q5T440 356 aaKnown RBP13.51□□□□□ -0.25
RAB40C-207ENST00000563109 TP53TG3Q9ULZ0 132 aa13.51□□□□□ -0.25
RAB40C-207ENST00000563109 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-207ENST00000563109 CXorf65A6NEN9 183 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 PGPEP1LA6NFU8 196 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 B4DEV8 164 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 C9JQL5 133 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 TYMSP04818 313 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 SPART-AS1P0CW21 52 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
RAB40C-207ENST00000563109 C11orf21Q9P2W6 132 aa13.5□□□□□ -0.25
RAB40C-207ENST00000563109 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 LYRM9A8MSI8 78 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 M0R036 132 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 SOHLH1Q5JUK2 328 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 FAM222AQ5U5X8 452 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 C11orf72Q8NBR9 251 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 C11orf45Q8TAV5 145 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 WWC2-AS2Q96NR7 200 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 GSN-AS1Q9NRJ2 163 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 LY96Q9Y6Y9 160 aa13.49□□□□□ -0.25
RAB40C-207ENST00000563109 TCL1AP56279 114 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 OR5I1Q13606 314 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 LINC01559Q495D7 138 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 UQCC3Q6UW78 93 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 IL17DQ8TAD2 202 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 NOP10Q9NPE3 64 aaKnown RBP13.48□□□□□ -0.25
RAB40C-207ENST00000563109 DKK2Q9UBU2 259 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 CELA1Q9UNI1 258 aa13.48□□□□□ -0.25
RAB40C-207ENST00000563109 IGKV3D-20A0A0C4DH25 116 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 GNRH2O43555 120 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 S100A4P26447 101 aaKnown RBP13.47□□□□□ -0.25
RAB40C-207ENST00000563109 ASIPP42127 132 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
RAB40C-207ENST00000563109 KRBOX1C9JBD0 128 aa13.46□□□□□ -0.25
RAB40C-207ENST00000563109 SFTA3P0C7M3 94 aa13.46□□□□□ -0.25
RAB40C-207ENST00000563109 DAZ2Q13117 558 aaKnown RBP13.46□□□□□ -0.25
RAB40C-207ENST00000563109 NAT8Q9UHE5 227 aa13.46□□□□□ -0.25
RAB40C-207ENST00000563109 TMSB15BA0A087X1C1 80 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 K7EN84 100 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 P01737 135 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 DAD1P61803 113 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 SPXQ9BT56 116 aa13.45□□□□□ -0.26
RAB40C-207ENST00000563109 TGP01266 2768 aa13.44□□□□□ -0.26
RAB40C-207ENST00000563109 C19orf71A6NCJ1 209 aa13.44□□□□□ -0.26
RAB40C-207ENST00000563109 NANOS2P60321 138 aaKnown RBP13.44□□□□□ -0.26
RAB40C-207ENST00000563109 LINC01551Q86U37 167 aa13.44□□□□□ -0.26
RAB40C-207ENST00000563109 TRGV1A0A0A0MS02 117 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 XKRY2A2RUG3 117 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 CXCL1P09341 107 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 DEFB130BP0DP73 79 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 DEFB130AP0DP74 79 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 RPS20P60866 119 aaKnown RBP13.43□□□□□ -0.26
RAB40C-207ENST00000563109 RPL19P84098 196 aaKnown RBP13.43□□□□□ -0.26
RAB40C-207ENST00000563109 OR2D3Q8NGH3 330 aa13.43□□□□□ -0.26
RAB40C-207ENST00000563109 GRIFINA4D1Z8 144 aa13.42□□□□□ -0.26
RAB40C-207ENST00000563109 ADIRFQ15847 76 aa13.42□□□□□ -0.26
RAB40C-207ENST00000563109 STAB2Q8WWQ8 2551 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 H3BVH4 76 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 M0R2P5 195 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 SPINK4O60575 86 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 GAGE7O76087 117 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 LGALS9BQ3B8N2 356 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 DNLZQ5SXM8 178 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 MUC7Q8TAX7 377 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
RAB40C-207ENST00000563109 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
RAB40C-207ENST00000563109 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
RAB40C-207ENST00000563109 MRPL16Q9NX20 251 aaKnown RBP13.41□□□□□ -0.26
RAB40C-207ENST00000563109 RNASE3P12724 160 aaKnown RBP13.4□□□□□ -0.26
RAB40C-207ENST00000563109 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
RAB40C-207ENST00000563109 Q6ZTC4 211 aa13.4□□□□□ -0.26
RAB40C-207ENST00000563109 Q6ZTI0 123 aa13.4□□□□□ -0.26
RAB40C-207ENST00000563109 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
RAB40C-207ENST00000563109 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
RAB40C-207ENST00000563109 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
RAB40C-207ENST00000563109 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
RAB40C-207ENST00000563109 MED14OSP0DP75 135 aa13.39□□□□□ -0.27
RAB40C-207ENST00000563109 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
RAB40C-207ENST00000563109 C15orf54Q8N8G6 183 aa13.39□□□□□ -0.27
RAB40C-207ENST00000563109 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
RAB40C-207ENST00000563109 SYT8Q8NBV8 401 aa13.38□□□□□ -0.27
RAB40C-207ENST00000563109 ISOC2Q96AB3 205 aa13.38□□□□□ -0.27
RAB40C-207ENST00000563109 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms