RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 LYPD5Q6UWN5 251 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 WFDC10BQ8IUB3 73 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 IQCF2Q8IXL9 164 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 RASL10AQ92737 203 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 PSMG3Q9BT73 122 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-203ENST00000562874 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 TCRAP04437 139 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 FUSP35637 526 aaKnown RBP eCLIP10.74□□□□□ -0.69
SF3B3-203ENST00000562874 ZNF80P51504 273 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-203ENST00000562874 SLAQ13239 276 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 Q6ZRN7 208 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-203ENST00000562874 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 PCNPQ8WW12 178 aaKnown RBP10.74□□□□□ -0.69
SF3B3-203ENST00000562874 SDF2L1Q9HCN8 221 aa10.74□□□□□ -0.69
SF3B3-203ENST00000562874 ABCA13Q86UQ4 5058 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 FXYD6-FXYD2A0A087WZ82 144 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 RNF222A6NCQ9 220 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 M0R2P5 195 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 RPL7L1Q6DKI1 246 aaKnown RBP10.73□□□□□ -0.69
SF3B3-203ENST00000562874 C5orf17Q8NAS9 161 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 C11orf21Q9P2W6 132 aa10.73□□□□□ -0.69
SF3B3-203ENST00000562874 C9JCJ5 164 aa10.72□□□□□ -0.69
SF3B3-203ENST00000562874 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-203ENST00000562874 PRNTQ86SH4 94 aa10.72□□□□□ -0.69
SF3B3-203ENST00000562874 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
SF3B3-203ENST00000562874 ASB13Q8WXK3 278 aa10.72□□□□□ -0.69
SF3B3-203ENST00000562874 PSG8Q9UQ74 426 aa10.72□□□□□ -0.69
SF3B3-203ENST00000562874 CDK2AP2O75956 126 aa10.71□□□□□ -0.69
SF3B3-203ENST00000562874 GCGP01275 180 aa10.71□□□□□ -0.69
SF3B3-203ENST00000562874 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.69
SF3B3-203ENST00000562874 SUMO1P63165 101 aaKnown RBP10.71□□□□□ -0.69
SF3B3-203ENST00000562874 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
SF3B3-203ENST00000562874 CXorf1O96002 111 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 DNAH10OSP0CZ25 163 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-203ENST00000562874 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 KCNS1Q96KK3 526 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-203ENST00000562874 TMEM167BQ9NRX6 74 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
SF3B3-203ENST00000562874 IGHV3-73A0A0B4J1V6 119 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 K7EQM0 130 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 MBP02144 154 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 ORM1P02763 201 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 FGF8P55075 233 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-203ENST00000562874 UBE2G2P60604 165 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 SERF2P84101 59 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 ZFP69Q49AA0 526 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 CYB561D1Q8N8Q1 229 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 NHLRC2Q8NBF2 726 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 INO80EQ8NBZ0 244 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-203ENST00000562874 TNFSF18Q9UNG2 199 aa10.69□□□□□ -0.7
SF3B3-203ENST00000562874 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
SF3B3-203ENST00000562874 G3V3Q6 166 aa10.68□□□□□ -0.7
SF3B3-203ENST00000562874 OR2T35Q8NGX2 323 aa10.68□□□□□ -0.7
SF3B3-203ENST00000562874 TXNDC17Q9BRA2 123 aa10.68□□□□□ -0.7
SF3B3-203ENST00000562874 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
SF3B3-203ENST00000562874 BORCS7-ASMTA0A0B4J1R7 106 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
SF3B3-203ENST00000562874 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
SF3B3-203ENST00000562874 GATA1P15976 413 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-203ENST00000562874 PPT1P50897 306 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 ERVFC1-1P60608 527 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 SMUG1Q53HV7 270 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 LINC00479Q96M42 142 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
SF3B3-203ENST00000562874 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
SF3B3-203ENST00000562874 TAAR5O14804 337 aa10.66□□□□□ -0.7
SF3B3-203ENST00000562874 ZNF506Q5JVG8 444 aa10.66□□□□□ -0.7
SF3B3-203ENST00000562874 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
SF3B3-203ENST00000562874 ARL2-SNX15V9GYD0 113 aa10.66□□□□□ -0.7
SF3B3-203ENST00000562874 PGPEP1LA6NFU8 196 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 SMLR1H3BR10 107 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 ARPC5O15511 151 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 RS1O15537 224 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
SF3B3-203ENST00000562874 Q86TA4 180 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
SF3B3-203ENST00000562874 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 PEX7O00628 323 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 IFNA7P01567 189 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 CRYGDP07320 174 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 EVI2AP22794 236 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
SF3B3-203ENST00000562874 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
SF3B3-203ENST00000562874 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
SF3B3-203ENST00000562874 RHOHQ15669 191 aa10.63□□□□□ -0.71
SF3B3-203ENST00000562874 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
SF3B3-203ENST00000562874 A0A087WTM6 91 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms