RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 CEBPGP53567 150 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 EMP1P54849 157 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 FAM74A3Q4VXF1 159 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 NAGKQ9UJ70 344 aa9.13□□□□□ -0.95
CDH11-204ENST00000562712 TIMM8BQ9Y5J9 83 aaPredicted RBP9.13□□□□□ -0.95
CDH11-204ENST00000562712 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 IGKV3D-20A0A0C4DH25 116 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 TEX48A0A1B0GUV7 120 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 GNRH2O43555 120 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 ORM1P02763 201 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
CDH11-204ENST00000562712 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 LY96Q9Y6Y9 160 aa9.12□□□□□ -0.95
CDH11-204ENST00000562712 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 PGPEP1LA6NFU8 196 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 LYRM9A8MSI8 78 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 KRBOX1C9JBD0 128 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 TYMSP04818 313 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
CDH11-204ENST00000562712 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 FAM222AQ5U5X8 452 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
CDH11-204ENST00000562712 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
CDH11-204ENST00000562712 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
CDH11-204ENST00000562712 B4DEV8 164 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 TCL1AP56279 114 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 SOHLH1Q5JUK2 328 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 PRR27Q6MZM9 219 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 UQCC3Q6UW78 93 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 DAZAP1Q96EP5 407 aaKnown RBP9.1□□□□□ -0.95
CDH11-204ENST00000562712 SPXQ9BT56 116 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
CDH11-204ENST00000562712 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 K7EN84 100 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 LGALS9BQ3B8N2 356 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 DNLZQ5SXM8 178 aa9.09□□□□□ -0.95
CDH11-204ENST00000562712 M0R036 132 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 SPINK4O60575 86 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 NANOS2P60321 138 aaKnown RBP9.08□□□□□ -0.96
CDH11-204ENST00000562712 OR5I1Q13606 314 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 LINC01551Q86U37 167 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 LINC00612Q8N6U2 182 aa9.08□□□□□ -0.96
CDH11-204ENST00000562712 RYR2Q92736 4967 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 C3orf84H3BNL1 204 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 P01737 135 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 CXCL1P09341 107 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 RNASE3P12724 160 aaKnown RBP9.07□□□□□ -0.96
CDH11-204ENST00000562712 ASIPP42127 132 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 MUC7Q8TAX7 377 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 RASL10AQ92737 203 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
CDH11-204ENST00000562712 M0R2P5 195 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 DEFB130BP0DP73 79 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 DEFB130AP0DP74 79 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 S100A4P26447 101 aaKnown RBP9.06□□□□□ -0.96
CDH11-204ENST00000562712 DAD1P61803 113 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 COMMD7Q86VX2 200 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 PTH2Q96A98 100 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
CDH11-204ENST00000562712 TMSB15BA0A087X1C1 80 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
CDH11-204ENST00000562712 RPL19P84098 196 aaKnown RBP9.05□□□□□ -0.96
CDH11-204ENST00000562712 Q6ZTC4 211 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 Q6ZTI0 123 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 NDUFAF3Q9BU61 184 aa9.05□□□□□ -0.96
CDH11-204ENST00000562712 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
CDH11-204ENST00000562712 GAGE12BA1L429 117 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 GAGE7O76087 117 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 ARMS2P0C7Q2 107 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
CDH11-204ENST00000562712 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms