RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
USB1-206ENST00000562534 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
USB1-206ENST00000562534 GNRH2O43555 120 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 GNG4P50150 75 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 TCL1AP56279 114 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 DAD1P61803 113 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
USB1-206ENST00000562534 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
USB1-206ENST00000562534 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 ORM1P02763 201 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 PEA15Q15121 130 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 SPXQ9BT56 116 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
USB1-206ENST00000562534 TRAV10A0A0B4J240 114 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 SH2D1AO60880 128 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 IFITM2Q01629 132 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 LGALS9BQ3B8N2 356 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 ZFAND6Q6FIF0 208 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 CEMP1Q6PRD7 247 aaPredicted RBP11.65□□□□□ -0.54
USB1-206ENST00000562534 Q6ZTC4 211 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
USB1-206ENST00000562534 IGKV3D-20A0A0C4DH25 116 aa11.64□□□□□ -0.55
USB1-206ENST00000562534 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
USB1-206ENST00000562534 TYMSP04818 313 aa11.64□□□□□ -0.55
USB1-206ENST00000562534 PARLQ9H300 379 aa11.64□□□□□ -0.55
USB1-206ENST00000562534 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
USB1-206ENST00000562534 B4DEV8 164 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 C9JCJ5 164 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 SPINK4O60575 86 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
USB1-206ENST00000562534 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
USB1-206ENST00000562534 CLLU1Q5K131 121 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
USB1-206ENST00000562534 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
USB1-206ENST00000562534 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 GAGE7O76087 117 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 CEBPGP53567 150 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
USB1-206ENST00000562534 TRBV20OR9-2A0A075B6H5 130 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 ATP5G1P05496 136 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 S100A4P26447 101 aaKnown RBP11.61□□□□□ -0.55
USB1-206ENST00000562534 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 Q6ZTI0 123 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 RASL10AQ92737 203 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
USB1-206ENST00000562534 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 M0R036 132 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 M0R2P5 195 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 ASIPP42127 132 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 OR5I1Q13606 314 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 LY96Q9Y6Y9 160 aa11.6□□□□□ -0.55
USB1-206ENST00000562534 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
USB1-206ENST00000562534 PTH2Q96A98 100 aa11.59□□□□□ -0.55
USB1-206ENST00000562534 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
USB1-206ENST00000562534 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
USB1-206ENST00000562534 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
USB1-206ENST00000562534 HTN3P15516 51 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 TCTAP57738 103 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
USB1-206ENST00000562534 C9orf85Q96MD7 179 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 NDUFAF3Q9BU61 184 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 MRPL16Q9NX20 251 aaKnown RBP11.58□□□□□ -0.56
USB1-206ENST00000562534 IL36BQ9NZH7 164 aa11.58□□□□□ -0.56
USB1-206ENST00000562534 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
USB1-206ENST00000562534 IGLL5B9A064 214 aa11.57□□□□□ -0.56
USB1-206ENST00000562534 C9JQL5 133 aa11.57□□□□□ -0.56
USB1-206ENST00000562534 CXCL1P09341 107 aa11.57□□□□□ -0.56
USB1-206ENST00000562534 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
USB1-206ENST00000562534 ZNF575Q86XF7 245 aa11.57□□□□□ -0.56
USB1-206ENST00000562534 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 F5H768 121 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 P01737 135 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 ZNF876PQ49A33 203 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
USB1-206ENST00000562534 K7EN84 100 aa11.55□□□□□ -0.56
USB1-206ENST00000562534 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
USB1-206ENST00000562534 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms