RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SFTA3P0C7M3 94 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 STAG3L2P0CL84 134 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 STAG3L3P0CL85 134 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 ATP6V0CP27449 155 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 CDC34P49427 236 aaPredicted RBP7.06□□□□□ -1.28
CLK3-205ENST00000561673 TDRG1Q3Y452 100 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 IQCF2Q8IXL9 164 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 SUN5Q8TC36 379 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 ZNF479Q96JC4 524 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 SPXQ9BT56 116 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 NAGKQ9UJ70 344 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 TRAV21A0A0B4J279 112 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 F6UZH7 168 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 SIVA1O15304 175 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 SERF2P84101 59 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
CLK3-205ENST00000561673 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 SGK494Q96LW2 274 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 PSMG3Q9BT73 122 aaPredicted RBP7.05□□□□□ -1.28
CLK3-205ENST00000561673 SH3BGRL3Q9H299 93 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 TREM1Q9NP99 234 aa7.05□□□□□ -1.28
CLK3-205ENST00000561673 MUC4Q99102 2169 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 K7EQD1 137 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 NXPH4O95158 308 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 MBP02144 154 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 GIPP09681 153 aaPredicted RBP7.04□□□□□ -1.28
CLK3-205ENST00000561673 BTF3P20290 206 aaKnown RBP7.04□□□□□ -1.28
CLK3-205ENST00000561673 GCHFRP30047 84 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 SPATA12Q7Z6I5 190 aa7.04□□□□□ -1.28
CLK3-205ENST00000561673 TRAV4A0A0B4J268 109 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 M0R2P5 195 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 CXorf1O96002 111 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 TCRAP04437 139 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 TYMSP04818 313 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 LINC00315P59091 139 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 NEGR1Q7Z3B1 354 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 C5orf17Q8NAS9 161 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 INO80EQ8NBZ0 244 aaPredicted RBP7.03□□□□□ -1.28
CLK3-205ENST00000561673 ASB13Q8WXK3 278 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
CLK3-205ENST00000561673 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
CLK3-205ENST00000561673 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 RNF222A6NCQ9 220 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 GGTLC3B5MD39 225 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 IGLV2-11P01706 119 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 GYPEP15421 78 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 ZNF80P51504 273 aaPredicted RBP7.02□□□□□ -1.29
CLK3-205ENST00000561673 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 RPL7L1Q6DKI1 246 aaKnown RBP7.02□□□□□ -1.29
CLK3-205ENST00000561673 Q6ZRN7 208 aaPredicted RBP7.02□□□□□ -1.29
CLK3-205ENST00000561673 OR4C5Q8NGB2 326 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 KCNS1Q96KK3 526 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 SDF2L1Q9HCN8 221 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 TMEM167BQ9NRX6 74 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 EPDR1Q9UM22 224 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 TNFRSF18Q9Y5U5 241 aa7.02□□□□□ -1.29
CLK3-205ENST00000561673 FXYD6-FXYD2A0A087WZ82 144 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 K7EQM0 130 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 TAAR5O14804 337 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 CDK2AP2O75956 126 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 ORM1P02763 201 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 SRIP30626 198 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 OR2T35Q8NGX2 323 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 PCNPQ8WW12 178 aaKnown RBP7.01□□□□□ -1.29
CLK3-205ENST00000561673 NDFIP1Q9BT67 221 aa7.01□□□□□ -1.29
CLK3-205ENST00000561673 BORCS7-ASMTA0A0B4J1R7 106 aa7□□□□□ -1.29
CLK3-205ENST00000561673 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
CLK3-205ENST00000561673 C9JCJ5 164 aa7□□□□□ -1.29
CLK3-205ENST00000561673 GCGP01275 180 aa7□□□□□ -1.29
CLK3-205ENST00000561673 PFN1P07737 140 aaKnown RBP7□□□□□ -1.29
CLK3-205ENST00000561673 FLI1Q01543 452 aaPredicted RBP7□□□□□ -1.29
CLK3-205ENST00000561673 ZNF726P1Q15940 193 aa7□□□□□ -1.29
CLK3-205ENST00000561673 ZNF876PQ49A33 203 aa7□□□□□ -1.29
CLK3-205ENST00000561673 SMUG1Q53HV7 270 aa7□□□□□ -1.29
CLK3-205ENST00000561673 PRNTQ86SH4 94 aa7□□□□□ -1.29
CLK3-205ENST00000561673 CYB561D1Q8N8Q1 229 aa7□□□□□ -1.29
CLK3-205ENST00000561673 TMEM75Q8N9X5 138 aa7□□□□□ -1.29
CLK3-205ENST00000561673 LINC00479Q96M42 142 aa7□□□□□ -1.29
CLK3-205ENST00000561673 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 TRAV34A0A0B4J273 112 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 A0A1W2PRE2 83 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 G3V3Q6 166 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 GATA1P15976 413 aaPredicted RBP6.99□□□□□ -1.29
CLK3-205ENST00000561673 CFAP126Q5VTH2 177 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 DPPA3Q6W0C5 159 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 TXNDC17Q9BRA2 123 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
CLK3-205ENST00000561673 CTXND1A0A1B0GTU2 59 aa6.98□□□□□ -1.29
CLK3-205ENST00000561673 FBLL1A6NHQ2 334 aaKnown RBP6.98□□□□□ -1.29
CLK3-205ENST00000561673 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
CLK3-205ENST00000561673 FGF8P55075 233 aaPredicted RBP6.98□□□□□ -1.29
CLK3-205ENST00000561673 UBE2G2P60604 165 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms