RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RPS20P60866 119 aaKnown RBP5.59□□□□□ -1.51
TPM1-231ENST00000561395 CD300EQ496F6 205 aaPredicted RBP5.59□□□□□ -1.51
TPM1-231ENST00000561395 PRR9Q5T870 116 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 Q6AWC8 147 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
TPM1-231ENST00000561395 WDR73Q6P4I2 378 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 ATP5L2Q7Z4Y8 100 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 APRG1Q8IVJ8 170 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 ZFAND2AQ8N6M9 145 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 SAV1Q9H4B6 383 aaPredicted RBP5.59□□□□□ -1.51
TPM1-231ENST00000561395 DNAH7Q8WXX0 4024 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 A0A1B0GXF2 115 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 OR4C46A6NHA9 309 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 C3orf84H3BNL1 204 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 SPINK4O60575 86 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 FABP9Q0Z7S8 132 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 COX19Q49B96 90 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 GDF5OSQ5U4N7 250 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 EBLN2Q6P2I7 272 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 RASL11AQ6T310 242 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 FOXI2Q6ZQN5 318 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 TMEM136Q6ZRR5 245 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 ZNF575Q86XF7 245 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 FRZBQ92765 325 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 PGLYRP4Q96LB8 373 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 ODF3Q96PU9 254 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 SPAG8Q99932 426 aaPredicted RBP5.58□□□□□ -1.52
TPM1-231ENST00000561395 B9D2Q9BPU9 175 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 GNB1LQ9BYB4 327 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 C11orf21Q9P2W6 132 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 TRAPPC1Q9Y5R8 145 aa5.58□□□□□ -1.52
TPM1-231ENST00000561395 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 TRAV21A0A0B4J279 112 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 LOC105371267A0A1B0GV96 52 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 A8MTW9 85 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 SNURFLB1AK76 121 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 KLLNB2CW77 178 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BKO60814 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 SAP30O75446 220 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 DUSP14O95147 198 aaKnown RBP5.57□□□□□ -1.52
TPM1-231ENST00000561395 HLA-DQA1P01909 254 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 ORM1P02763 201 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 MT-ND6P03923 174 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BJP06899 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 TRGC1P0CF51 173 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BOP23527 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BBP33778 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 CTRLP40313 264 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 LEPP41159 167 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BDP58876 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BCP62807 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HBBP68871 147 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST2H2BEQ16778 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.57□□□□□ -1.52
TPM1-231ENST00000561395 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BHQ93079 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BNQ99877 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 HIST1H2BMQ99879 126 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
TPM1-231ENST00000561395 MAP6D1Q9H9H5 199 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 ZNF256Q9Y2P7 627 aaPredicted RBP5.57□□□□□ -1.52
TPM1-231ENST00000561395 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
TPM1-231ENST00000561395 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 A0A1B0GUT8 65 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 A0A1B0GW15 77 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 IGLV1-51P01701 117 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 S100A6P06703 90 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 GPX1P07203 203 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 ARMS2P0C7Q2 107 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 HLA-DRB4P13762 266 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 RNASE4P34096 147 aaKnown RBP5.56□□□□□ -1.52
TPM1-231ENST00000561395 DEFB131AP59861 70 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 Q6ZQT7 251 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 HLA-DRB4X5D2U9 266 aa5.56□□□□□ -1.52
TPM1-231ENST00000561395 LCE6AA0A183 80 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 GRIFINA4D1Z8 144 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 C5orf52A6NGY3 159 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 KNCNA6PVL3 124 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 H3BMM0 161 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 J3KRW8 73 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 IGKV3-20P01619 116 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 IGLL1P15814 213 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 TSPOP30536 169 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 RAB4BP61018 213 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 RIGQ13278 110 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 KIR3DS1Q14943 382 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 ODF3L2Q3SX64 289 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 LYZL1Q6UWQ5 148 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 AMTNQ6UX39 209 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 FER1L6-AS1Q8NA97 138 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 GATD1Q8NB37 220 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 BORCS7Q96B45 105 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 TPPP3Q9BW30 176 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 U3KQK5 164 aa5.55□□□□□ -1.52
TPM1-231ENST00000561395 AGRNO00468 2067 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms