RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 PAX4O43316 350 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 FAM74A1Q5RGS3 127 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 DPPA3Q6W0C5 159 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 ARL6IP6Q8N6S5 226 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 UPK3BQ9BT76 320 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 Q9H8V8 135 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 EPDR1Q9UM22 224 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 TRGV11A0A075B6L2 103 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 TRAV21A0A0B4J279 112 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 MBP02144 154 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 FLI1Q01543 452 aaPredicted RBP8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 PRNTQ86SH4 94 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 RASL10AQ92737 203 aa8.68□□□□□ -1.02
CHRNA3-208ENST00000561128 FAM74A7A6NL05 159 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 GCGP01275 180 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 Q86TA4 180 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 KCNRGQ8N5I3 272 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 TMEM167BQ9NRX6 74 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
CHRNA3-208ENST00000561128 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 PEX7O00628 323 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 NXPH4O95158 308 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 AKR1C8PQ5T2L2 129 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 SDF2L1Q9HCN8 221 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 ARL2-SNX15V9GYD0 113 aa8.66□□□□□ -1.02
CHRNA3-208ENST00000561128 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 TRAV4A0A0B4J268 109 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 TRGV4A0A0C4DH28 118 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 A0A1W2PRE2 83 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 K7EQD1 137 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 M0R2P5 195 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 SPXQ9BT56 116 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 TNFRSF18Q9Y5U5 241 aa8.65□□□□□ -1.02
CHRNA3-208ENST00000561128 A0A1B0GV50 99 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 PGPEP1LA6NFU8 196 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 GYPEP15421 78 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 CRIP1P50238 77 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 LINC00315P59091 139 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 ZNF345Q14585 488 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 ZC2HC1AQ96GY0 325 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 NDFIP1Q9BT67 221 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
CHRNA3-208ENST00000561128 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 C9JCJ5 164 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 TAAR5O14804 337 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 IFNA7P01567 189 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 SMUG1Q53HV7 270 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
CHRNA3-208ENST00000561128 BCL2L11O43521 198 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 GATA1P15976 413 aaPredicted RBP8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 SOHLH1Q5JUK2 328 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 CFAP126Q5VTH2 177 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 Q6ZSN1 163 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 OR4C5Q8NGB2 326 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 FAM213BQ8TBF2 198 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 JPT2Q9H910 190 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 Q9UF83 564 aa8.62□□□□□ -1.03
CHRNA3-208ENST00000561128 K7EQM0 130 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 SIVA1O15304 175 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 RS1O15537 224 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 TTC32Q5I0X7 151 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 NHLRC2Q8NBF2 726 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 ZNF471Q9BX82 626 aaPredicted RBP8.61□□□□□ -1.03
CHRNA3-208ENST00000561128 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 HMSDA8MTL9 139 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 M0R036 132 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 PAGE4O60829 102 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 SH2D1AO60880 128 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 SLC25A29Q8N8R3 303 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
CHRNA3-208ENST00000561128 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 H3BVH4 76 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 SRIP30626 198 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 ZFP69Q49AA0 526 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 CST9LP1Q5W188 147 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 TMUB2Q71RG4 321 aa8.59□□□□□ -1.03
CHRNA3-208ENST00000561128 SAMD10Q9BYL1 202 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms