RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RNASE11Q8TAA1 199 aaKnown RBP3.86□□□□□ -1.79
HERC1-208ENST00000560462 AP3S1Q92572 193 aa3.86□□□□□ -1.79
HERC1-208ENST00000560462 PDCD10Q9BUL8 212 aa3.86□□□□□ -1.79
HERC1-208ENST00000560462 MRPL32Q9BYC8 188 aaKnown RBP3.86□□□□□ -1.79
HERC1-208ENST00000560462 SLC25A39Q9BZJ4 359 aaPredicted RBP3.86□□□□□ -1.79
HERC1-208ENST00000560462 IGKV2D-24A0A075B6R9 120 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 IGKV1OR2-108A0A075B7D4 117 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 IGHV3-16A0A0C4DH30 117 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 C3orf85A0A1B0GTC6 90 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 INS-IGF2F8WCM5 200 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 M0R2T5 61 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 CORTO00230 105 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 GSTZ1O43708 216 aaPredicted RBP3.85□□□□□ -1.79
HERC1-208ENST00000560462 ATG12O94817 140 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 ORM1P02763 201 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 RNASE2P10153 161 aaKnown RBP3.85□□□□□ -1.79
HERC1-208ENST00000560462 SNCAP37840 140 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 OPRK1P41145 380 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 TAS2R19P59542 299 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 TMEM183BQ1AE95 376 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 SP6Q3SY56 376 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 ZFP69Q49AA0 526 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 GPR107Q5VW38 600 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 FAAP20Q6NZ36 180 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 TMEM183AQ8IXX5 376 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 OR13C8Q8NGS7 320 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 MARCH1Q8TCQ1 289 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 SPACA4Q8TDM5 124 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 LITAFQ99732 161 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 MIXL1Q9H2W2 232 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 COPZ2Q9P299 210 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 MTFP1Q9UDX5 166 aa3.85□□□□□ -1.79
HERC1-208ENST00000560462 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 E9PLD3 99 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
HERC1-208ENST00000560462 GABARAPH6UMI1 98 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 RGS5O15539 181 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 RAB3DO95716 219 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 TSPAN13O95857 204 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 OR5AC1P0C628 307 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 PSG3Q16557 428 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 TMEM229BQ8NBD8 167 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 LHFPL5Q8TAF8 219 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 ZFAND1Q8TCF1 268 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 C15orf40Q8WUR7 153 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 SMIM4Q8WVI0 70 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 LINC00479Q96M42 142 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 VGLL1Q99990 258 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 TMEM222Q9H0R3 208 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 ENY2Q9NPA8 101 aa3.84□□□□□ -1.79
HERC1-208ENST00000560462 MRPL36Q9P0J6 103 aaKnown RBP3.84□□□□□ -1.79
HERC1-208ENST00000560462 C14orf166Q9Y224 244 aaKnown RBP3.84□□□□□ -1.79
HERC1-208ENST00000560462 LOC100131303A0A0U1RQF7 123 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 GGTLC3B5MD39 225 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 GATA1P15976 413 aaPredicted RBP3.83□□□□□ -1.8
HERC1-208ENST00000560462 LEPP41159 167 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 SUB1P53999 127 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERC1-208ENST00000560462 MRPS10P82664 201 aaKnown RBP3.83□□□□□ -1.8
HERC1-208ENST00000560462 RPL19P84098 196 aaKnown RBP3.83□□□□□ -1.8
HERC1-208ENST00000560462 SSBP1Q04837 148 aaKnown RBP3.83□□□□□ -1.8
HERC1-208ENST00000560462 OR2F1Q13607 317 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 BSXQ3C1V8 233 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 SAMD13Q5VXD3 122 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 Q8NBF4 154 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 TERB2Q8NHR7 220 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 MRPS26Q9BYN8 205 aaKnown RBP3.83□□□□□ -1.8
HERC1-208ENST00000560462 NAA60Q9H7X0 242 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 JPT2Q9H910 190 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 URGCP-MRPS24S4R325 110 aa3.83□□□□□ -1.8
HERC1-208ENST00000560462 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 TRAV1-1A0A0B4J248 108 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 TRGV4A0A0C4DH28 118 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 CRYM-AS1A6NIL9 109 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 CEBPZOSA8MTT3 80 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 DISC1C4P0D8 188 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 CDS2O95674 445 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 IGKV1-17P01599 117 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 IGLC1P0CG04 106 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 AKAIN1P0CW23 69 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 HTR2BP41595 481 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 RPL5P46777 297 aaKnown RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 CCR6P51684 374 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 RND2P52198 227 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 SPCS3P61009 180 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 RAB11AP62491 216 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 RHOBP62745 196 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 SURF2Q15527 256 aaPredicted RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 ZNF506Q5JVG8 444 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 DAZ4Q86SG3 579 aaKnown RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 CLVS1Q8IUQ0 354 aaPredicted RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 SELENOHQ8IZQ5 122 aaKnown RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 INO80EQ8NBZ0 244 aaPredicted RBP3.82□□□□□ -1.8
HERC1-208ENST00000560462 OR4X1Q8NH49 305 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 LYPD6BQ8NI32 183 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 Q8WTZ3 238 aa3.82□□□□□ -1.8
HERC1-208ENST00000560462 IL22RA2Q969J5 263 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms