RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 PRR27Q6MZM9 219 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 WDR73Q6P4I2 378 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 OR4B1Q8NGF8 309 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
SMAD3-214ENST00000560402 LINC00479Q96M42 142 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 V9GYV3 84 aa9.81□□□□□ -0.84
SMAD3-214ENST00000560402 P01737 135 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 AMBPP02760 352 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 CT83Q5H943 113 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 Q6ZTC4 211 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 CSNK1G2-AS1Q8NCQ2 148 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-214ENST00000560402 PSG8Q9UQ74 426 aa9.8□□□□□ -0.84
SMAD3-214ENST00000560402 IGHV4-4A0A075B6R2 117 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 A8MWL6 223 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 SLC17A3O00476 420 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 MT-ND6P03923 174 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 TRGC2P03986 189 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 NHLRC2Q8NBF2 726 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 C17orf77Q96MU5 243 aa9.79□□□□□ -0.84
SMAD3-214ENST00000560402 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
SMAD3-214ENST00000560402 RPP21Q9H633 154 aaKnown RBP9.79□□□□□ -0.84
SMAD3-214ENST00000560402 ZNF331Q9NQX6 463 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-214ENST00000560402 RBAKDNA6NC62 111 aa9.78□□□□□ -0.84
SMAD3-214ENST00000560402 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
SMAD3-214ENST00000560402 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
SMAD3-214ENST00000560402 NAT8BQ9UHF3 227 aa9.78□□□□□ -0.84
SMAD3-214ENST00000560402 TRAPPC1Q9Y5R8 145 aa9.78□□□□□ -0.84
SMAD3-214ENST00000560402 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 XKRY2A2RUG3 117 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 HLA-DRB4P13762 266 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 NUDT10Q8NFP7 164 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 TSKUQ8WUA8 353 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 NUDT11Q96G61 164 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 C16orf92Q96LL3 132 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 NEU1Q99519 415 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 HLA-DRB4X5D2U9 266 aa9.77□□□□□ -0.85
SMAD3-214ENST00000560402 TEX48A0A1B0GUV7 120 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 TMEM189A5PLL7 270 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 H3BMM0 161 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 FRZBQ92765 325 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
SMAD3-214ENST00000560402 DEFB131BA0A096LNP1 70 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 M0R3E3 92 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 P0DMU3 169 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 FAM231AP0DMU4 169 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 FAM231CP0DMU5 169 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 AKR1D1P51857 326 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 NDUFA6P56556 154 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 SNRPEP62304 92 aaKnown RBP9.75□□□□□ -0.85
SMAD3-214ENST00000560402 Q6AWC8 147 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 ZNF705AQ6ZN79 300 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-214ENST00000560402 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
SMAD3-214ENST00000560402 TRAV8-1A0A0A6YYK1 113 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 C5orf52A6NGY3 159 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 S100A8P05109 93 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 ID1P41134 155 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 TCL1AP56279 114 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 RPS20P60866 119 aaKnown RBP9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-214ENST00000560402 TMEM78Q5T7P6 136 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 FOXI2Q6ZQN5 318 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 OR2D3Q8NGH3 330 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 GNB1LQ9BYB4 327 aa9.74□□□□□ -0.85
SMAD3-214ENST00000560402 IGKV2-40A0A087WW87 121 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-214ENST00000560402 ZNF705FA8MVS1 300 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-214ENST00000560402 IGKV2D-40P01614 121 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-214ENST00000560402 ZNF705DP0CH99 300 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-214ENST00000560402 ZNF705BP0CI00 300 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-214ENST00000560402 S100A2P29034 98 aa9.73□□□□□ -0.85
SMAD3-214ENST00000560402 RAB4BP61018 213 aa9.73□□□□□ -0.85
SMAD3-214ENST00000560402 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms