RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 A0A0J9YX75 114 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 MT-ND6P03923 174 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 PRR9Q5T870 116 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 Q6AWC8 147 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 WFDC10AQ9H1F0 79 aa12.22□□□□□ -0.45
TPM1-219ENST00000559397 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
TPM1-219ENST00000559397 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
TPM1-219ENST00000559397 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
TPM1-219ENST00000559397 ZNF124Q15973 351 aa12.21□□□□□ -0.45
TPM1-219ENST00000559397 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
TPM1-219ENST00000559397 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
TPM1-219ENST00000559397 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
TPM1-219ENST00000559397 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 S100A6P06703 90 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 FOXI2Q6ZQN5 318 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 TMSB15BA0A087X1C1 80 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 KLLNB2CW77 178 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 ORM1P02763 201 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 IGLC6P0CF74 106 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
TPM1-219ENST00000559397 EBLN2Q6P2I7 272 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 DEFB125Q8N687 156 aa12.19□□□□□ -0.46
TPM1-219ENST00000559397 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
TPM1-219ENST00000559397 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
TPM1-219ENST00000559397 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
TPM1-219ENST00000559397 HBBP68871 147 aa12.18□□□□□ -0.46
TPM1-219ENST00000559397 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 A8MTW9 85 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 GPX1P07203 203 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 CTRLP40313 264 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 Q6ZQT7 251 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 AGRNO00468 2067 aa12.17□□□□□ -0.46
TPM1-219ENST00000559397 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 NDUFA6P56556 154 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 RAB4BP61018 213 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 COA6Q5JTJ3 125 aaKnown RBP12.16□□□□□ -0.46
TPM1-219ENST00000559397 FER1L6-AS1Q8NA97 138 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 A0A1B0GW15 77 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 UBE2CO00762 179 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 HOXA5P20719 270 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 LEPP41159 167 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 CAMPP49913 170 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 RIGQ13278 110 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 KIR3DS1Q14943 382 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 AMTNQ6UX39 209 aa12.16□□□□□ -0.46
TPM1-219ENST00000559397 DNAH9Q9NYC9 4486 aa12.15□□□□□ -0.46
TPM1-219ENST00000559397 K7EIL1 84 aa12.15□□□□□ -0.46
TPM1-219ENST00000559397 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
TPM1-219ENST00000559397 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
TPM1-219ENST00000559397 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 H3BMM0 161 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 J3KRW8 73 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 APCSP02743 223 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 SLAQ13239 276 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
TPM1-219ENST00000559397 A8MZ25 164 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 S100A8P05109 93 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 IGHV4-30-4P0DP06 118 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 PRKDCP78527 4128 aaKnown RBP12.13□□□□□ -0.47
TPM1-219ENST00000559397 F2Z2F3 143 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 TSPOP30536 169 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
TPM1-219ENST00000559397 TPPP3Q9BW30 176 aa12.13□□□□□ -0.47
TPM1-219ENST00000559397 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
TPM1-219ENST00000559397 C7orf71A4D174 169 aa12.12□□□□□ -0.47
TPM1-219ENST00000559397 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
TPM1-219ENST00000559397 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
TPM1-219ENST00000559397 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
TPM1-219ENST00000559397 STHQ8IWL8 128 aa12.12□□□□□ -0.47
TPM1-219ENST00000559397 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
TPM1-219ENST00000559397 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 CDKN1BP46527 198 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
TPM1-219ENST00000559397 HUWE1Q7Z6Z7 4374 aaKnown RBP12.1□□□□□ -0.47
TPM1-219ENST00000559397 SNAI2O43623 268 aa12.1□□□□□ -0.47
TPM1-219ENST00000559397 OR5AL1P0C617 328 aa12.1□□□□□ -0.47
TPM1-219ENST00000559397 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
TPM1-219ENST00000559397 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
TPM1-219ENST00000559397 RPL35AP18077 110 aaKnown RBP12.1□□□□□ -0.47
TPM1-219ENST00000559397 Q0VG73 95 aa12.1□□□□□ -0.47
TPM1-219ENST00000559397 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
TPM1-219ENST00000559397 M0R2Z0 102 aa12.09□□□□□ -0.47
TPM1-219ENST00000559397 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
TPM1-219ENST00000559397 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
TPM1-219ENST00000559397 TDRG1Q3Y452 100 aa12.09□□□□□ -0.47
TPM1-219ENST00000559397 HIST3H2BBQ8N257 126 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms