RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TIMM8BQ9Y5J9 83 aaPredicted RBP15.48■□□□□ 0.07
SNX1-206ENST00000559389 RAB19A4D1S5 217 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 LYRM9A8MSI8 78 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 FABP5P3A8MUU1 101 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 GNG4P50150 75 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 ZNF415Q09FC8 603 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 FAM162BQ5T6X4 162 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 KCNS1Q96KK3 526 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 GSN-AS1Q9NRJ2 163 aa15.47■□□□□ 0.07
SNX1-206ENST00000559389 SNURFLB1AK76 121 aa15.46■□□□□ 0.07
SNX1-206ENST00000559389 IGLV2-8P01709 118 aa15.46■□□□□ 0.07
SNX1-206ENST00000559389 TYMSP04818 313 aa15.46■□□□□ 0.07
SNX1-206ENST00000559389 SRP19P09132 144 aaKnown RBP15.46■□□□□ 0.07
SNX1-206ENST00000559389 NOP10Q9NPE3 64 aaKnown RBP15.46■□□□□ 0.07
SNX1-206ENST00000559389 C9JCJ5 164 aa15.45■□□□□ 0.06
SNX1-206ENST00000559389 DAZ2Q13117 558 aaKnown RBP15.45■□□□□ 0.06
SNX1-206ENST00000559389 C12orf74Q32Q52 190 aa15.45■□□□□ 0.06
SNX1-206ENST00000559389 IGKV3D-20A0A0C4DH25 116 aa15.44■□□□□ 0.06
SNX1-206ENST00000559389 IGHV3-16A0A0C4DH30 117 aa15.44■□□□□ 0.06
SNX1-206ENST00000559389 MDFICQ9P1T7 246 aa15.44■□□□□ 0.06
SNX1-206ENST00000559389 GNRH2O43555 120 aa15.43■□□□□ 0.06
SNX1-206ENST00000559389 CEBPGP53567 150 aa15.43■□□□□ 0.06
SNX1-206ENST00000559389 SRSF3P84103 164 aaKnown RBP15.43■□□□□ 0.06
SNX1-206ENST00000559389 PEA15Q15121 130 aa15.43■□□□□ 0.06
SNX1-206ENST00000559389 Q6ZTC4 211 aa15.43■□□□□ 0.06
SNX1-206ENST00000559389 LINC00612Q8N6U2 182 aa15.43■□□□□ 0.06
SNX1-206ENST00000559389 PGPEP1LA6NFU8 196 aa15.42■□□□□ 0.06
SNX1-206ENST00000559389 C9JQL5 133 aa15.42■□□□□ 0.06
SNX1-206ENST00000559389 LINC01559Q495D7 138 aa15.42■□□□□ 0.06
SNX1-206ENST00000559389 PRR27Q6MZM9 219 aa15.42■□□□□ 0.06
SNX1-206ENST00000559389 SMDT1Q9H4I9 107 aa15.42■□□□□ 0.06
SNX1-206ENST00000559389 C3orf84H3BNL1 204 aa15.41■□□□□ 0.06
SNX1-206ENST00000559389 M0R036 132 aa15.41■□□□□ 0.06
SNX1-206ENST00000559389 MGST1P10620 155 aaKnown RBP15.41■□□□□ 0.06
SNX1-206ENST00000559389 DAD1P61803 113 aa15.41■□□□□ 0.06
SNX1-206ENST00000559389 B4DEV8 164 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 KRBOX1C9JBD0 128 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 SPINK4O60575 86 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 ORM1P02763 201 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 DEFB130BP0DP73 79 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 DEFB130AP0DP74 79 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 ZFAND6Q6FIF0 208 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 PHLDA1Q8WV24 401 aaPredicted RBP15.4■□□□□ 0.06
SNX1-206ENST00000559389 SMIM7Q9BQ49 75 aa15.4■□□□□ 0.06
SNX1-206ENST00000559389 Q6ZTI0 123 aa15.39■□□□□ 0.05
SNX1-206ENST00000559389 C9orf85Q96MD7 179 aa15.39■□□□□ 0.05
SNX1-206ENST00000559389 C19orf71A6NCJ1 209 aa15.38■□□□□ 0.05
SNX1-206ENST00000559389 NUPR2A6NF83 97 aa15.38■□□□□ 0.05
SNX1-206ENST00000559389 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
SNX1-206ENST00000559389 SPXQ9BT56 116 aa15.38■□□□□ 0.05
SNX1-206ENST00000559389 BIN3Q9NQY0 253 aa15.38■□□□□ 0.05
SNX1-206ENST00000559389 MRPL16Q9NX20 251 aaKnown RBP15.38■□□□□ 0.05
SNX1-206ENST00000559389 TRGV1A0A0A0MS02 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 TRAV10A0A0B4J240 114 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 GAGE12BA1L429 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 ZNF727A8MUV8 499 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 K7EN84 100 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 GAGE7O76087 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 GAGE12FP0CL80 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 GAGE12GP0CL81 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 GAGE12IP0CL82 117 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 ASIPP42127 132 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 LGALS9BQ3B8N2 356 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 DNLZQ5SXM8 178 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 LY96Q9Y6Y9 160 aa15.37■□□□□ 0.05
SNX1-206ENST00000559389 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
SNX1-206ENST00000559389 CASC10Q5T4H9 136 aa15.36■□□□□ 0.05
SNX1-206ENST00000559389 CEMP1Q6PRD7 247 aaPredicted RBP15.36■□□□□ 0.05
SNX1-206ENST00000559389 ZNF575Q86XF7 245 aa15.36■□□□□ 0.05
SNX1-206ENST00000559389 OCC1Q8TAD7 63 aa15.36■□□□□ 0.05
SNX1-206ENST00000559389 C18orf15Q96N68 181 aa15.36■□□□□ 0.05
SNX1-206ENST00000559389 TMSB15BA0A087X1C1 80 aa15.35■□□□□ 0.05
SNX1-206ENST00000559389 CXCL1P09341 107 aa15.35■□□□□ 0.05
SNX1-206ENST00000559389 OR5I1Q13606 314 aa15.35■□□□□ 0.05
SNX1-206ENST00000559389 GRIFINA4D1Z8 144 aa15.34■□□□□ 0.05
SNX1-206ENST00000559389 M0R2P5 195 aa15.34■□□□□ 0.05
SNX1-206ENST00000559389 S100A4P26447 101 aaKnown RBP15.34■□□□□ 0.05
SNX1-206ENST00000559389 FAM74A3Q4VXF1 159 aa15.34■□□□□ 0.05
SNX1-206ENST00000559389 IL36BQ9NZH7 164 aa15.34■□□□□ 0.05
SNX1-206ENST00000559389 DEFB131BA0A096LNP1 70 aa15.33■□□□□ 0.04
SNX1-206ENST00000559389 H3BVH4 76 aa15.33■□□□□ 0.04
SNX1-206ENST00000559389 ATP5G1P05496 136 aa15.33■□□□□ 0.04
SNX1-206ENST00000559389 LINC01551Q86U37 167 aa15.33■□□□□ 0.04
SNX1-206ENST00000559389 RASL10AQ92737 203 aa15.33■□□□□ 0.04
SNX1-206ENST00000559389 DAZAP1Q96EP5 407 aaKnown RBP15.33■□□□□ 0.04
SNX1-206ENST00000559389 P01737 135 aa15.32■□□□□ 0.04
SNX1-206ENST00000559389 TRGV2A0A075B6R0 118 aa15.31■□□□□ 0.04
SNX1-206ENST00000559389 MED14OSP0DP75 135 aa15.31■□□□□ 0.04
SNX1-206ENST00000559389 HTN3P15516 51 aa15.31■□□□□ 0.04
SNX1-206ENST00000559389 SOHLH1Q5JUK2 328 aa15.31■□□□□ 0.04
SNX1-206ENST00000559389 PTH2Q96A98 100 aa15.31■□□□□ 0.04
SNX1-206ENST00000559389 ARMS2P0C7Q2 107 aa15.3■□□□□ 0.04
SNX1-206ENST00000559389 OR2D3Q8NGH3 330 aa15.3■□□□□ 0.04
SNX1-206ENST00000559389 RNASE7Q9H1E1 156 aaKnown RBP15.3■□□□□ 0.04
SNX1-206ENST00000559389 SCRT2Q9NQ03 307 aa15.3■□□□□ 0.04
SNX1-206ENST00000559389 KLK5Q9Y337 293 aaPredicted RBP15.3■□□□□ 0.04
SNX1-206ENST00000559389 SFTA3P0C7M3 94 aa15.29■□□□□ 0.04
SNX1-206ENST00000559389 RPS20P60866 119 aaKnown RBP15.29■□□□□ 0.04
SNX1-206ENST00000559389 ZNF876PQ49A33 203 aa15.29■□□□□ 0.04
SNX1-206ENST00000559389 FAM231DQ6ZW35 169 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms