RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 NPCDR1Q9BY65 106 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 BANF2Q9H503 90 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 PRR34Q9NV39 138 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 EPDR1Q9UM22 224 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 HS3ST2Q9Y278 367 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 SDK2Q58EX2 2172 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 BCORQ6W2J9 1755 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 NCKAP5O14513 1909 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 HEATR5AQ86XA9 2040 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 DOCK9Q9BZ29 2069 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 A0A1W2PQD3 144 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 MEIS3P1A6NDR6 274 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 C3orf84H3BNL1 204 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 MSMBP08118 114 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 IGLC6P0CF74 106 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 DEFA4P12838 97 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 MUC1P15941 1255 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 RPL22P35268 128 aaKnown RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 RPL35P42766 123 aaKnown RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 RPL28P46779 137 aaKnown RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 COPZ1P61923 177 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 SUPT4H1P63272 117 aaKnown RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 SELENOWP63302 87 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF117Q03924 483 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 HES1Q14469 280 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 LGALSLQ3ZCW2 172 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 KHDC3LQ587J8 217 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF660Q6AZW8 331 aaPredicted RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 NOXRED1Q6NXP6 359 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 C22orf39Q6P5X5 142 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 CTAGE3PQ8IX95 158 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 OR10P1Q8NGE3 313 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 PFN4Q8NHR9 129 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 C14orf144Q96I85 54 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF714Q96N38 554 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 NAA38Q9BRA0 125 aaKnown RBP2.06□□□□□ -2.08
LRRC28-212ENST00000558911 ASF1BQ9NVP2 202 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 HEY1Q9Y5J3 304 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 MYOM3Q5VTT5 1437 aa2.06□□□□□ -2.08
LRRC28-212ENST00000558911 DLEC1Q9Y238 1755 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 MYO5AQ9Y4I1 1855 aaKnown RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 TRGV10A0A0A0MS01 117 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 IGHV3-15A0A0B4J1V0 119 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 A0A0J9YW62 118 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 C7orf66A4D0T2 115 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 F6UZH7 168 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 C19orf84I3L1E1 186 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 K7EM74 188 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 NPFFO15130 113 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 SLC22A1O15245 554 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 CREBL2O60519 120 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 IGKV3-15P01624 115 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 MT-ND6P03923 174 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 TSPAN19P0C672 248 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF22P17026 224 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 FOXF1Q12946 379 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 TAF9Q16594 264 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 HSD17B12Q53GQ0 312 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 AMMECR1LQ6DCA0 310 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 SCIMPQ6UWF3 145 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 GLIPR1L1Q6UWM5 242 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 DEFB128Q7Z7B8 93 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 OR4S1Q8NGB4 309 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 OR5A2Q8NGI9 324 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 KLF14Q8TD94 323 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 LYSTQ99698 3801 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 TAF9BQ9HBM6 251 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 COA4Q9NYJ1 87 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 MARCOQ9UEW3 520 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-212ENST00000558911 PIK3C2BO00750 1634 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 SLX4Q8IY92 1834 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 SCN8AQ9UQD0 1980 aa2.05□□□□□ -2.08
LRRC28-212ENST00000558911 FAM236AA0A1B0GUQ0 79 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 FAM236BA0A1B0GV22 79 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 GGTLC3B5MD39 225 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF670-ZNF695F2Z2N8 137 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 H3BMG7 143 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 TCRAP04437 139 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 GPX1P07203 203 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 HLA-EP13747 358 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 CRYGSP22914 178 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 FOXA1P55317 472 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 DIAPH2-AS1Q14236 149 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 OCIAD2Q56VL3 154 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 RNASE10Q5GAN6 216 aaKnown RBP2.04□□□□□ -2.08
LRRC28-212ENST00000558911 EIF5AL1Q6IS14 154 aaKnown RBP2.04□□□□□ -2.08
LRRC28-212ENST00000558911 UBR3Q6ZT12 1888 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 C7orf65Q6ZTY9 151 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 PHF5AQ7RTV0 110 aaKnown RBP2.04□□□□□ -2.08
LRRC28-212ENST00000558911 Q8NAQ8 132 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 WFDC11Q8NEX6 87 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 OR5H6Q8NGV6 325 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 CASKIN1Q8WXD9 1431 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 PRELID3AQ96N28 172 aa2.04□□□□□ -2.08
LRRC28-212ENST00000558911 PDCD10Q9BUL8 212 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms