RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
LRRC28-210ENST00000558879 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
LRRC28-210ENST00000558879 FXYD6-FXYD2A0A087WZ82 144 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 TRAV4A0A0B4J268 109 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 GNRH2O43555 120 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
LRRC28-210ENST00000558879 INO80EQ8NBZ0 244 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-210ENST00000558879 OR2T35Q8NGX2 323 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-210ENST00000558879 SDF2L1Q9HCN8 221 aa11.65□□□□□ -0.54
LRRC28-210ENST00000558879 TRGV4A0A0C4DH28 118 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 M0R2P5 195 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 SIVA1O15304 175 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 NXPH4O95158 308 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-210ENST00000558879 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-210ENST00000558879 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 NDFIP1Q9BT67 221 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 C11orf21Q9P2W6 132 aa11.64□□□□□ -0.55
LRRC28-210ENST00000558879 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 K7EQD1 137 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 LINC00315P59091 139 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 SUMO1P63165 101 aaKnown RBP11.63□□□□□ -0.55
LRRC28-210ENST00000558879 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
LRRC28-210ENST00000558879 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
LRRC28-210ENST00000558879 K7EQM0 130 aa11.62□□□□□ -0.55
LRRC28-210ENST00000558879 ORM1P02763 201 aa11.62□□□□□ -0.55
LRRC28-210ENST00000558879 FLI1Q01543 452 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-210ENST00000558879 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
LRRC28-210ENST00000558879 FBLL1A6NHQ2 334 aaKnown RBP11.61□□□□□ -0.55
LRRC28-210ENST00000558879 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
LRRC28-210ENST00000558879 GCGP01275 180 aa11.61□□□□□ -0.55
LRRC28-210ENST00000558879 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
LRRC28-210ENST00000558879 SRIP30626 198 aa11.61□□□□□ -0.55
LRRC28-210ENST00000558879 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
LRRC28-210ENST00000558879 GYPEP15421 78 aa11.6□□□□□ -0.55
LRRC28-210ENST00000558879 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
LRRC28-210ENST00000558879 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
LRRC28-210ENST00000558879 C9JCJ5 164 aa11.59□□□□□ -0.55
LRRC28-210ENST00000558879 TAAR5O14804 337 aa11.59□□□□□ -0.55
LRRC28-210ENST00000558879 GATA1P15976 413 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-210ENST00000558879 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
LRRC28-210ENST00000558879 SMUG1Q53HV7 270 aa11.59□□□□□ -0.55
LRRC28-210ENST00000558879 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
LRRC28-210ENST00000558879 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
LRRC28-210ENST00000558879 CDK2AP2O75956 126 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
LRRC28-210ENST00000558879 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 PTH2Q96A98 100 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 TXNDC17Q9BRA2 123 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 HSPG2P98160 4391 aa11.58□□□□□ -0.56
LRRC28-210ENST00000558879 LOC100131303A0A0U1RQF7 123 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 ARPC5O15511 151 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 SAPCD1Q5SSQ6 148 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 Q86TA4 180 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 ARL2-SNX15V9GYD0 113 aa11.57□□□□□ -0.56
LRRC28-210ENST00000558879 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 PEX7O00628 323 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 RS1O15537 224 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
LRRC28-210ENST00000558879 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 AKR1C8PQ5T2L2 129 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 LINC00479Q96M42 142 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 LY96Q9Y6Y9 160 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 DNAH5Q8TE73 4624 aa11.56□□□□□ -0.56
LRRC28-210ENST00000558879 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 K7EP13 123 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 CIDEAO60543 219 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 TIRAPP58753 221 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 UBE2G2P60604 165 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 ZNF345Q14585 488 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-210ENST00000558879 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
LRRC28-210ENST00000558879 PGPEP1LA6NFU8 196 aa11.54□□□□□ -0.56
LRRC28-210ENST00000558879 COX8CQ7Z4L0 72 aa11.54□□□□□ -0.56
LRRC28-210ENST00000558879 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
LRRC28-210ENST00000558879 HIST1H2BAQ96A08 127 aa11.54□□□□□ -0.56
LRRC28-210ENST00000558879 TRBV6-4A0A1B0GX49 114 aa11.53□□□□□ -0.56
LRRC28-210ENST00000558879 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
LRRC28-210ENST00000558879 PPT1P50897 306 aa11.53□□□□□ -0.56
LRRC28-210ENST00000558879 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
LRRC28-210ENST00000558879 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
LRRC28-210ENST00000558879 ABCA13Q86UQ4 5058 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 294.3 ms