RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZMAT4Q9H898 229 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 A0A0G2JMZ2 1700 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 SPTBN1Q01082 2364 aaKnown RBP11.06□□□□□ -0.64
SPG11-210ENST00000558319 IGLL5B9A064 214 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 NUPR1O60356 82 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 IGHV4-59P01825 116 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 IGLC1P0CG04 106 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 ZNF493Q6ZR52 646 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 Q9H8V8 135 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 K7ENP7 123 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 HIST2H2BDQ6DRA6 164 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 SPTBN2O15020 2390 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 HELZP42694 1942 aaKnown RBP11.05□□□□□ -0.64
SPG11-210ENST00000558319 IGHV2-70DA0A0C4DH43 119 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 SLURP1P55000 103 aa11.05□□□□□ -0.64
SPG11-210ENST00000558319 J3KT08 172 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 HERVK_113P63121 156 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 SPRNQ5BIV9 151 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 Q6ZS92 163 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 Q6ZS49 121 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 FXYD5Q96DB9 178 aa11.04□□□□□ -0.64
SPG11-210ENST00000558319 PSMB8P28062 276 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 FAM231DQ6ZW35 169 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 H3BRN7 92 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 SBF1O95248 1867 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 OOSP1A8MZH6 123 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 DEFB112Q30KQ8 113 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 Q6ZR03 302 aa11.03□□□□□ -0.64
SPG11-210ENST00000558319 CACNA1BQ00975 2339 aa11.02□□□□□ -0.64
SPG11-210ENST00000558319 PLXND1Q9Y4D7 1925 aa11.02□□□□□ -0.64
SPG11-210ENST00000558319 HOXB4P17483 251 aaPredicted RBP11.02□□□□□ -0.64
SPG11-210ENST00000558319 COX7B2Q8TF08 81 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 ABCA4P78363 2273 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 FOXE3Q13461 319 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 DAND5Q8N907 189 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 APOC4P55056 127 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 A0A0B4J2C4 111 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 VOPP1Q96AW1 172 aa11.02□□□□□ -0.65
SPG11-210ENST00000558319 NACAE9PAV3 2078 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 ZSWIM8A7E2V4 1837 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 C17orf58Q2M2W7 97 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
SPG11-210ENST00000558319 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
SPG11-210ENST00000558319 RPL39LQ96EH5 51 aaKnown RBP11□□□□□ -0.65
SPG11-210ENST00000558319 PROP1O75360 226 aa11□□□□□ -0.65
SPG11-210ENST00000558319 LTBP1Q14766 1721 aa11□□□□□ -0.65
SPG11-210ENST00000558319 RBAKDNA6NC62 111 aa11□□□□□ -0.65
SPG11-210ENST00000558319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■■■ 27.4
SPG11-210ENST00000558319 C5orf38Q86SI9 138 aa11□□□□□ -0.65
SPG11-210ENST00000558319 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
SPG11-210ENST00000558319 E9PQ18 207 aa11□□□□□ -0.65
SPG11-210ENST00000558319 ZNF134P52741 427 aa11□□□□□ -0.65
SPG11-210ENST00000558319 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
SPG11-210ENST00000558319 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 FXYD2P54710 66 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 WT1-ASQ06250 92 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 NCOR1O75376 2440 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 SPTA1P02549 2419 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 ATOX1O00244 68 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 U3KQE9 123 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 LTAP01374 205 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 IGHV4-38-2P0DP08 117 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
SPG11-210ENST00000558319 ZNF833PQ6ZTB9 187 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 ACYP1P07311 99 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 ZNF524Q96C55 264 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 WDR81Q562E7 1941 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 A4D1N5 150 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 FHL1Q13642 323 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 ZFP2Q6ZN57 461 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 WDR90Q96KV7 1748 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
SPG11-210ENST00000558319 A0A0U1RQV1 116 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 CCL24O00175 119 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 NPBQ8NG41 125 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 RITA1Q96K30 269 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 IGLV3-9A0A075B6K5 115 aa10.97□□□□□ -0.65
SPG11-210ENST00000558319 FOXI1Q12951 378 aa10.96□□□□□ -0.65
SPG11-210ENST00000558319 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.65
SPG11-210ENST00000558319 USF3Q68DE3 2245 aa10.96□□□□□ -0.65
SPG11-210ENST00000558319 F8W735 103 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms