RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 LYZL1Q6UWQ5 148 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 C17orf82Q86X59 251 aaPredicted RBP8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 APRG1Q8IVJ8 170 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 POLEQ07864 2286 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 MLANAQ16655 118 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 C9orf139Q6ZV77 190 aa8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 SPTAN1Q13813 2472 aaKnown RBP8.48□□□□□ -1.05
SEMA4B-204ENST00000558065 SPRY2O43597 315 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 FOLR3P41439 243 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 CRIP1P50238 77 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 NPC2P61916 151 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 KLHL30-AS1Q8NEE0 82 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 FAM110DQ8TAY7 271 aaPredicted RBP8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 IGHV3-43A0A0B4J1X8 118 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 IGHV3-43DP0DP04 118 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 RNF185Q96GF1 192 aa8.47□□□□□ -1.05
SEMA4B-204ENST00000558065 C5orf42Q9H799 3197 aa8.46□□□□□ -1.05
SEMA4B-204ENST00000558065 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.05
SEMA4B-204ENST00000558065 PROP1O75360 226 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 TRIAP1O43715 76 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 C10orf113Q5VZT2 155 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 CDH23Q9H251 3354 aa8.46□□□□□ -1.06
SEMA4B-204ENST00000558065 TMEM30CPA0ZSE6 113 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 C15orf61A6NNL5 157 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 PATE3B3GLJ2 98 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 H7C2G1 150 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 FOXF2Q12947 444 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 VMA21Q3ZAQ7 101 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 ABCA1O95477 2261 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 WDFY3Q8IZQ1 3526 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 IGKV3D-11A0A0A0MRZ8 115 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 PLAUP00749 431 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 PI4KAP42356 2102 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 COX7A2P2O60397 106 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 S1PR3Q99500 378 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 ZNF71Q9NQZ8 489 aaPredicted RBP8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 ACACAQ13085 2346 aa8.45□□□□□ -1.06
SEMA4B-204ENST00000558065 RHOHQ15669 191 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 CCL11P51671 97 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 C12orf77C9JDV5 145 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 DEFB123Q8N688 67 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 NRACQ8N912 160 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 PRR25Q96S07 402 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 Q9H3A6 140 aa8.44□□□□□ -1.06
SEMA4B-204ENST00000558065 CXorf67Q86X51 503 aaPredicted RBP8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 TMEM14BQ9NUH8 114 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 BDP1A6H8Y1 2624 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 CCL4P13236 92 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 PMAIP1Q13794 54 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 FAM223AQ8IWN6 122 aa8.43□□□□□ -1.06
SEMA4B-204ENST00000558065 TRBV6-1A0A0K0K1D8 114 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 LINC00305Q7Z4B0 112 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 IQCF6A8MYZ5 107 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 H3BTX0 84 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 GATA1P15976 413 aaPredicted RBP8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 SYNJ2BPP57105 145 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 TMEM200BQ69YZ2 307 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 Q8IYB0 196 aa8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 RNASE6Q93091 150 aaKnown RBP8.42□□□□□ -1.06
SEMA4B-204ENST00000558065 NDUFC2O95298 119 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 CCL3P10147 92 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 ADORA2A-AS1P86434 159 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 GFRALQ6UXV0 394 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 J3QT63 122 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 WNT9BO14905 357 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 GP9P14770 177 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 SS18L1O75177 396 aaPredicted RBP8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 LOXL3P58215 753 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 CD69Q07108 199 aa8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 KLF14Q8TD94 323 aaPredicted RBP8.41□□□□□ -1.06
SEMA4B-204ENST00000558065 TNCP24821 2201 aa8.4□□□□□ -1.06
SEMA4B-204ENST00000558065 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.4□□□□□ -1.06
SEMA4B-204ENST00000558065 AMELXQ99217 191 aa8.4□□□□□ -1.06
SEMA4B-204ENST00000558065 SMIM26A0A096LP01 95 aa8.4□□□□□ -1.06
SEMA4B-204ENST00000558065 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
SEMA4B-204ENST00000558065 CD164Q04900 197 aa8.4□□□□□ -1.07
SEMA4B-204ENST00000558065 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 LAGE3Q14657 143 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 SS18Q15532 418 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 Q1RN00 199 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 TMEM190Q8WZ59 177 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 A8MZ25 164 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 LIFP15018 202 aa8.39□□□□□ -1.07
SEMA4B-204ENST00000558065 C2orf83Q53S99 150 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms