RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.66
NEDD1-213ENST00000557644 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 C16orf74Q96GX8 76 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 GSN-AS1Q9NRJ2 163 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 ORM1P02763 201 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 TYMSP04818 313 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
NEDD1-213ENST00000557644 SMIM12Q96EX1 92 aa10.94□□□□□ -0.66
NEDD1-213ENST00000557644 LINC00862A6NCI5 91 aa10.94□□□□□ -0.66
NEDD1-213ENST00000557644 SFTA3P0C7M3 94 aa10.94□□□□□ -0.66
NEDD1-213ENST00000557644 RPL19P84098 196 aaKnown RBP10.94□□□□□ -0.66
NEDD1-213ENST00000557644 SOHLH1Q5JUK2 328 aa10.94□□□□□ -0.66
NEDD1-213ENST00000557644 ZNF575Q86XF7 245 aa10.94□□□□□ -0.66
NEDD1-213ENST00000557644 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
NEDD1-213ENST00000557644 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
NEDD1-213ENST00000557644 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
NEDD1-213ENST00000557644 NOP10Q9NPE3 64 aaKnown RBP10.93□□□□□ -0.66
NEDD1-213ENST00000557644 B4DEV8 164 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 KCNS1Q96KK3 526 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 DNAH7Q8WXX0 4024 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 TMEM189A5PLL7 270 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 KRBOX1C9JBD0 128 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
NEDD1-213ENST00000557644 C19orf71A6NCJ1 209 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 LINC01559Q495D7 138 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
NEDD1-213ENST00000557644 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-213ENST00000557644 TRGV11A0A075B6L2 103 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 GRIFINA4D1Z8 144 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 TMEM241Q24JQ0 296 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 FAM74A3Q4VXF1 159 aa10.91□□□□□ -0.66
NEDD1-213ENST00000557644 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
NEDD1-213ENST00000557644 SNURFLB1AK76 121 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 TCL1AP56279 114 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.66
NEDD1-213ENST00000557644 UQCC3Q6UW78 93 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 IL17DQ8TAD2 202 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 C11orf45Q8TAV5 145 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.66
NEDD1-213ENST00000557644 LY96Q9Y6Y9 160 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
NEDD1-213ENST00000557644 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
NEDD1-213ENST00000557644 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 NAT8Q9UHE5 227 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 RPL23P62829 140 aaKnown RBP10.89□□□□□ -0.67
NEDD1-213ENST00000557644 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
NEDD1-213ENST00000557644 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
NEDD1-213ENST00000557644 P01737 135 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 ADIRFQ15847 76 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 C12orf74Q32Q52 190 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 Q6ZTI0 123 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 CSMD3Q7Z407 3707 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 TMEM218A2RU14 115 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 GZMBP10144 247 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
NEDD1-213ENST00000557644 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
NEDD1-213ENST00000557644 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
NEDD1-213ENST00000557644 LYRM9A8MSI8 78 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 H3BVH4 76 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 ASIPP42127 132 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 GAGE12BA1L429 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 GAGE7O76087 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 GAGE12FP0CL80 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 GAGE12GP0CL81 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 GAGE12IP0CL82 117 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 ERVFC1-1P60608 527 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 Q6ZTC4 211 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
NEDD1-213ENST00000557644 SPINK4O60575 86 aa10.86□□□□□ -0.67
NEDD1-213ENST00000557644 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
NEDD1-213ENST00000557644 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
NEDD1-213ENST00000557644 DAD1P61803 113 aa10.85□□□□□ -0.67
NEDD1-213ENST00000557644 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
NEDD1-213ENST00000557644 IL36BQ9NZH7 164 aa10.85□□□□□ -0.67
NEDD1-213ENST00000557644 MUC4Q99102 2169 aa10.85□□□□□ -0.67
NEDD1-213ENST00000557644 F8W036 122 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 DNLZQ5SXM8 178 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 FAM231DQ6ZW35 169 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 SPXQ9BT56 116 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 M0R2P5 195 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
NEDD1-213ENST00000557644 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
NEDD1-213ENST00000557644 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
NEDD1-213ENST00000557644 TEX48A0A1B0GUV7 120 aa10.83□□□□□ -0.68
NEDD1-213ENST00000557644 SLC7A5P1Q8MH63 180 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms