RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 TDRG1Q3Y452 100 aa7.39□□□□□ -1.23
SYNE2-227ENST00000557307 FAM159AQ6UWV7 190 aa7.39□□□□□ -1.23
SYNE2-227ENST00000557307 TMED6Q8WW62 240 aa7.39□□□□□ -1.23
SYNE2-227ENST00000557307 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
SYNE2-227ENST00000557307 TRAV4A0A0B4J268 109 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 IGLV2-11P01706 119 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 ZNF726P1Q15940 193 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
SYNE2-227ENST00000557307 PQLC2Q6ZP29 291 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 Q8N1X5 172 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 CMTM2Q8TAZ6 248 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 RAB24Q969Q5 203 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 SPXQ9BT56 116 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 TREM1Q9NP99 234 aa7.38□□□□□ -1.23
SYNE2-227ENST00000557307 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 TRAV21A0A0B4J279 112 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 G3V3Q6 166 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 TCRAP04437 139 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 GCHFRP30047 84 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 SRIP30626 198 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 OR2G3Q8NGZ4 309 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 SUN5Q8TC36 379 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 AQP10Q96PS8 301 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
SYNE2-227ENST00000557307 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 C9JCJ5 164 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 M0R2P5 195 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-227ENST00000557307 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
SYNE2-227ENST00000557307 Q8N3U1 123 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 OR4C5Q8NGB2 326 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 LINC00479Q96M42 142 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 PSG8Q9UQ74 426 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 LY96Q9Y6Y9 160 aa7.36□□□□□ -1.23
SYNE2-227ENST00000557307 A0A087WTM6 91 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 TRAV34A0A0B4J273 112 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 PGPEP1LA6NFU8 196 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 GCGP01275 180 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
SYNE2-227ENST00000557307 XGP55808 180 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 HAMPP81172 84 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 SLAQ13239 276 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 FAM74A1Q5RGS3 127 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 Q6ZSN1 163 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 ASB13Q8WXK3 278 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
SYNE2-227ENST00000557307 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 Q9UF83 564 aa7.35□□□□□ -1.23
SYNE2-227ENST00000557307 RS1O15537 224 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 PTTG1O95997 202 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 ERVFC1-1P60608 527 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
SYNE2-227ENST00000557307 ZNF506Q5JVG8 444 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 CFAP126Q5VTH2 177 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 ARL6IP6Q8N6S5 226 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 SLC25A29Q8N8R3 303 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 C5orf17Q8NAS9 161 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 PCNPQ8WW12 178 aaKnown RBP7.34□□□□□ -1.23
SYNE2-227ENST00000557307 MED28Q9H204 178 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 MSRB1Q9NZV6 116 aa7.34□□□□□ -1.23
SYNE2-227ENST00000557307 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 ORM1P02763 201 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 FGF8P55075 233 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-227ENST00000557307 FLI1Q01543 452 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-227ENST00000557307 ZNF876PQ49A33 203 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 NHLRC2Q8NBF2 726 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 JPT2Q9H910 190 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 EPDR1Q9UM22 224 aa7.33□□□□□ -1.24
SYNE2-227ENST00000557307 FXYD6-FXYD2A0A087WZ82 144 aa7.32□□□□□ -1.24
SYNE2-227ENST00000557307 FBLL1A6NHQ2 334 aaKnown RBP7.32□□□□□ -1.24
SYNE2-227ENST00000557307 CRYGDP07320 174 aa7.32□□□□□ -1.24
SYNE2-227ENST00000557307 PFN1P07737 140 aaKnown RBP7.32□□□□□ -1.24
SYNE2-227ENST00000557307 UBE2G2P60604 165 aa7.32□□□□□ -1.24
SYNE2-227ENST00000557307 KCNS1Q96KK3 526 aa7.32□□□□□ -1.24
SYNE2-227ENST00000557307 TNFSF18Q9UNG2 199 aa7.32□□□□□ -1.24
SYNE2-227ENST00000557307 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 SMLR1H3BR10 107 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 CXorf1O96002 111 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 IGHV3-30P01768 117 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 GIPP09681 153 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-227ENST00000557307 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 IGHV3-30-5P0DP03 117 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 CRIP1P50238 77 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 PPT1P50897 306 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 WFDC2Q14508 124 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 Q86TA4 180 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 CYB561D1Q8N8Q1 229 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 TXNDC17Q9BRA2 123 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 NDFIP1Q9BT67 221 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 ARL2-SNX15V9GYD0 113 aa7.31□□□□□ -1.24
SYNE2-227ENST00000557307 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
SYNE2-227ENST00000557307 SERTM2A0A1B0GWG4 89 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms