RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 RASL11BQ9BPW5 248 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 SHANK2-AS3Q9BTD1 123 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 SIRPDQ9H106 197 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 HIGD1BQ9P298 99 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 RABAC1Q9UI14 185 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 PSG8Q9UQ74 426 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 HLA-DRB4X5D2U9 266 aa3.59□□□□□ -1.83
ATXN3-246ENST00000557030 URB1O60287 2271 aaKnown RBP3.59□□□□□ -1.84
ATXN3-246ENST00000557030 CHD3Q12873 2000 aaKnown RBP3.58□□□□□ -1.84
ATXN3-246ENST00000557030 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 TMEM189A5PLL7 270 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 H0Y8G0 127 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 H3BRN7 92 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 J3QR89 54 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 ENSAO43768 121 aaKnown RBP3.58□□□□□ -1.84
ATXN3-246ENST00000557030 RBP4P02753 201 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 CRYGBP07316 175 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SMIM13P0DJ93 91 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 FABP2P12104 132 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 CCL3L1P16619 93 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 BMI1P35226 326 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 DLX6P56179 175 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 TMEM155Q4W5P6 130 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 HCP5Q6MZN7 132 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 DUX4L9Q6RFH8 374 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-246ENST00000557030 COX8CQ7Z4L0 72 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 PPP1R27Q86WC6 154 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 OR8A1Q8NGG7 326 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 IFI27L1Q96BM0 104 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 TMEM133Q9H2Q1 129 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 PRORYQ9H606 182 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SIGLEC8Q9NYZ4 499 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 MRPL36Q9P0J6 103 aaKnown RBP3.58□□□□□ -1.84
ATXN3-246ENST00000557030 KAAG1Q9UBP8 84 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SMPXQ9UHP9 88 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SIGLEC9Q9Y336 463 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 MGAQ8IWI9 3026 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 ATMQ13315 3056 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 YLPM1P49750 1951 aaKnown RBP3.58□□□□□ -1.84
ATXN3-246ENST00000557030 KIAA2026Q5HYC2 2103 aa3.58□□□□□ -1.84
ATXN3-246ENST00000557030 PIEZO2Q9H5I5 2752 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TRAV8-1A0A0A6YYK1 113 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 A0A0U1RRA0 63 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TMEM238C9JI98 176 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 D6R8Y8 96 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 H3BUT2 72 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 I3L2K1 104 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 J3QKU1 62 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ZNF207O43670 478 aaKnown RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 FCN3O75636 299 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ATP5LO75964 103 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 IGHV1-8P0DP01 117 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 CD24P25063 80 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 LOXP28300 417 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 IFI27P40305 119 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ZNF138P52744 262 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 CACNG7P62955 275 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 RELNP78509 3460 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 CCL8P80075 99 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TAL2Q16559 108 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ADAMTSL5Q6ZMM2 481 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 NEGR1Q7Z3B1 354 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ERASQ7Z444 233 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 STHQ8IWL8 128 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 INTS1Q8N201 2190 aaKnown RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TPPP3Q9BW30 176 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TEX15Q9BXT5 2789 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 MAP1LC3AQ9H492 121 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 NXT2Q9NPJ8 142 aaKnown RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ZNRD1Q9P1U0 126 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 CHTOPQ9Y3Y2 248 aaKnown RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 TIMM8BQ9Y5J9 83 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-246ENST00000557030 INSIG2Q9Y5U4 225 aa3.57□□□□□ -1.84
ATXN3-246ENST00000557030 ACACAQ13085 2346 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 A0A096LNJ9 63 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 IGHV1-3A0A0C4DH29 117 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 WI2-2373I1.2A0A1W2PRP0 233 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 H3BTX0 84 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 NDUFS8O00217 210 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 NCR2O95944 276 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 IGKV1-17P01599 117 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 RPL7P18124 248 aaKnown RBP3.56□□□□□ -1.84
ATXN3-246ENST00000557030 FCER1GP30273 86 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 CKS2P33552 79 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 UQCRFS1P47985 274 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 MRPL51Q4U2R6 128 aaKnown RBP3.56□□□□□ -1.84
ATXN3-246ENST00000557030 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 EXOC3-AS1Q8N2X6 119 aa3.56□□□□□ -1.84
ATXN3-246ENST00000557030 SPAG8Q99932 426 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms