RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PARLQ9H300 379 aa12.54□□□□□ -0.4
PSEN1-218ENST00000556864 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
PSEN1-218ENST00000556864 C9JCJ5 164 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 CEBPGP53567 150 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
PSEN1-218ENST00000556864 IFITM2Q01629 132 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
PSEN1-218ENST00000556864 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 C3orf84H3BNL1 204 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 TYMSP04818 313 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
PSEN1-218ENST00000556864 DAD1P61803 113 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
PSEN1-218ENST00000556864 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
PSEN1-218ENST00000556864 GSN-AS1Q9NRJ2 163 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
PSEN1-218ENST00000556864 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
PSEN1-218ENST00000556864 ORM1P02763 201 aa12.51□□□□□ -0.41
PSEN1-218ENST00000556864 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
PSEN1-218ENST00000556864 SPXQ9BT56 116 aa12.51□□□□□ -0.41
PSEN1-218ENST00000556864 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
PSEN1-218ENST00000556864 IGHV3-16A0A0C4DH30 117 aa12.5□□□□□ -0.41
PSEN1-218ENST00000556864 B4DEV8 164 aa12.5□□□□□ -0.41
PSEN1-218ENST00000556864 ASIPP42127 132 aa12.5□□□□□ -0.41
PSEN1-218ENST00000556864 C12orf74Q32Q52 190 aa12.5□□□□□ -0.41
PSEN1-218ENST00000556864 SMIM7Q9BQ49 75 aa12.5□□□□□ -0.41
PSEN1-218ENST00000556864 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 M0R036 132 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 CRIP1P50238 77 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 OR5I1Q13606 314 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 Q6ZTC4 211 aa12.49□□□□□ -0.41
PSEN1-218ENST00000556864 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 ZNF727A8MUV8 499 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 S100A4P26447 101 aaKnown RBP12.48□□□□□ -0.41
PSEN1-218ENST00000556864 LGALS9BQ3B8N2 356 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 PHLDA1Q8WV24 401 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-218ENST00000556864 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
PSEN1-218ENST00000556864 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
PSEN1-218ENST00000556864 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 GNRH2O43555 120 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 SPINK4O60575 86 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 IGLV2-8P01709 118 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 CXCL1P09341 107 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-218ENST00000556864 LY96Q9Y6Y9 160 aa12.47□□□□□ -0.41
PSEN1-218ENST00000556864 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 PGPEP1LA6NFU8 196 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 GAGE7O76087 117 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
PSEN1-218ENST00000556864 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-218ENST00000556864 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
PSEN1-218ENST00000556864 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 DEFB131BA0A096LNP1 70 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 M0R2P5 195 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 P01737 135 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 ATP5G1P05496 136 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 RPS20P60866 119 aaKnown RBP12.45□□□□□ -0.42
PSEN1-218ENST00000556864 Q6ZTI0 123 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
PSEN1-218ENST00000556864 TMSB15BA0A087X1C1 80 aa12.44□□□□□ -0.42
PSEN1-218ENST00000556864 HTN3P15516 51 aa12.44□□□□□ -0.42
PSEN1-218ENST00000556864 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
PSEN1-218ENST00000556864 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
PSEN1-218ENST00000556864 XKRY2A2RUG3 117 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 GRIFINA4D1Z8 144 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 H3BVH4 76 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 SRSF3P84103 164 aaKnown RBP12.43□□□□□ -0.42
PSEN1-218ENST00000556864 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 CASC10Q5T4H9 136 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 NDUFAF3Q9BU61 184 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 IL36BQ9NZH7 164 aa12.43□□□□□ -0.42
PSEN1-218ENST00000556864 C9JQL5 133 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
PSEN1-218ENST00000556864 SYT8Q8NBV8 401 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 OCC1Q8TAD7 63 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 PTH2Q96A98 100 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 NAT8Q9UHE5 227 aa12.42□□□□□ -0.42
PSEN1-218ENST00000556864 DNAH7Q8WXX0 4024 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 K7EN84 100 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 RPL19P84098 196 aaKnown RBP12.41□□□□□ -0.42
PSEN1-218ENST00000556864 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 LINC01551Q86U37 167 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 RASL10AQ92737 203 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms