RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, human

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-222	ENST00000556768	LINC00612	Q8N6U2	182 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	HSD17B11	Q8NBQ5	300 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768		Q8TAT8	98 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	C18orf15	Q96N68	181 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	AQP10	Q96PS8	301 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	NDFIP1	Q9BT67	221 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	TMPRSS5	Q9H3S3	457 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768		Q9H8V8	135 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	RPH3AL	Q9UNE2	315 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	DNAH6	Q9C0G6	4158 aa		5.12	□□□□□ -1.59
SCFD1-222	ENST00000556768	NBDY	A0A0U1RRE5	68 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	SERTM2	A0A1B0GWG4	89 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	GIP	P09681	153 aa	Predicted RBP	5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	CDC34	P49427	236 aa	Predicted RBP	5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	TTC32	Q5I0X7	151 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768		Q6ZR54	194 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	ST6GAL2	Q96JF0	529 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	PSMG3	Q9BT73	122 aa	Predicted RBP	5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	WFDC1	Q9HC57	220 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	TRAV21	A0A0B4J279	112 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	RTL8C	O15255	209 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	HMGB3	O15347	200 aa	Known RBP	5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	PAX4	O43316	350 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	SPINK4	O60575	86 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	CXorf1	O96002	111 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	HOXA5	P20719	270 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	RAB2A	P61019	212 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	RGS21	Q2M5E4	152 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	MUC21	Q5SSG8	566 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	LCE3B	Q5TA77	95 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	GOLT1A	Q6ZVE7	132 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	IQCF2	Q8IXL9	164 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	C11orf72	Q8NBR9	251 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	OR2G3	Q8NGZ4	309 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	ZNRF2	Q8NHG8	242 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	KCNS1	Q96KK3	526 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	SPX	Q9BT56	116 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	TREM1	Q9NP99	234 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	TMEM167B	Q9NRX6	74 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	PRO0255	Q9UI72	69 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	NAGK	Q9UJ70	344 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	TNFSF18	Q9UNG2	199 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	HHLA3	Q9XRX5	114 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	LINC00588	Q9Y4M8	146 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	KLF12	Q9Y4X4	402 aa		5.11	□□□□□ -1.59
SCFD1-222	ENST00000556768	PKHD1	P08F94	4074 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	FXYD6-FXYD2	A0A087WZ82	144 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	TRGV4	A0A0C4DH28	118 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	ARL14EPL	P0DKL9	152 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	ATP6V0C	P27449	155 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	TMEM183B	Q1AE95	376 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	ZFP69	Q49AA0	526 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768		Q6AWC8	147 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	TMEM183A	Q8IXX5	376 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	C6orf223	Q8N319	242 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	OR2T35	Q8NGX2	323 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	TP53TG3	Q9ULZ0	132 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	ICOS	Q9Y6W8	199 aa		5.1	□□□□□ -1.59
SCFD1-222	ENST00000556768	FBLL1	A6NHQ2	334 aa	Known RBP	5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	IGHV3-53	P01767	116 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	STAG3L2	P0CL84	134 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	STAG3L3	P0CL85	134 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	MRPL23	Q16540	153 aa	Known RBP	5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	PRR9	Q5T870	116 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	C5orf17	Q8NAS9	161 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	PCNP	Q8WW12	178 aa	Known RBP	5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	SDF2L1	Q9HCN8	221 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	MRPL16	Q9NX20	251 aa	Known RBP	5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	FAT2	Q9NYQ8	4349 aa		5.09	□□□□□ -1.59
SCFD1-222	ENST00000556768	TRAV9-2	A0A087WT02	112 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	TAAR5	O14804	337 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	EIF3G	O75821	320 aa	Known RBP eCLIP	5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	GCHFR	P30047	84 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	ESRG	Q1W209	222 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	TDRG1	Q3Y452	100 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	RASL10A	Q92737	203 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	UPK3B	Q9BT76	320 aa		5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768	NKX6-2	Q9C056	277 aa	Predicted RBP	5.09	□□□□□ -1.6
SCFD1-222	ENST00000556768		A0A1W2PPQ1	181 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768		M0R2P5	195 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	IFNA7	P01567	189 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	ORM1	P02763	201 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	PPT1	P50897	306 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	SAPCD1	Q5SSQ6	148 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	AKR1C8P	Q5T2L2	129 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	OR4C5	Q8NGB2	326 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	MDFIC	Q9P1T7	246 aa		5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768	MRPS16	Q9Y3D3	137 aa	Known RBP	5.08	□□□□□ -1.6
SCFD1-222	ENST00000556768		A0A096LPF7	62 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	TRAV8-1	A0A0A6YYK1	113 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768		C9JCJ5	164 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	SIVA1	O15304	175 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	TCRA	P04437	139 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	SRI	P30626	198 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	CRYBA4	P53673	196 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	SMUG1	Q53HV7	270 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768		Q5BKY6	102 aa		5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768	RPL7L1	Q6DKI1	246 aa	Known RBP	5.07	□□□□□ -1.6
SCFD1-222	ENST00000556768		Q6ZNX1	250 aa		5.07	□□□□□ -1.6

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