RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 SH3BGRL3Q9H299 93 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF331Q9NQX6 463 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 TP53TG1Q9Y2A0 90 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 TRBV19A0A075B6N1 114 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 A0A087X0K7 114 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TRAV12-3A0A0B4J271 114 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 A0A1B0GV50 99 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 KANTRA0A1W2PQU2 76 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 M0R3E3 92 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TAAR5O14804 337 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 MRPS12O15235 138 aaKnown RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 INSP01308 110 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 MBP02144 154 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 SLC25A5P05141 298 aaKnown RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 GPX1P07203 203 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 GIG44P09565 113 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 RBMY1A1P0DJD3 496 aaKnown RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 RBMY1CP0DJD4 496 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 IGLC2P0DOY2 106 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 MIFP14174 115 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TSPOP30536 169 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 LEPP41159 167 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 RRN3P1Q2M238 152 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 PRR27Q6MZM9 219 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 BAP18Q8IXM2 172 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 RPP25LQ8N5L8 163 aaKnown RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF471Q9BX82 626 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 EDA2RQ9HAV5 297 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TMEM14CQ9P0S9 112 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 TNFSF18Q9UNG2 199 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 PRELID1Q9Y255 219 aa3.35□□□□□ -1.87
ATXN3-243ENST00000556671 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-243ENST00000556671 IGKV2-40A0A087WW87 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-243ENST00000556671 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 IGLL5B9A064 214 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 IGKV2D-40P01614 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-243ENST00000556671 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 CT45A10P0DMU9 189 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 CXCL2P19875 107 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 CDKN1BP46527 198 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-243ENST00000556671 UBE2G2P60604 165 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 SERF2P84101 59 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 C1orf158Q8N1D5 194 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 PHLDA1Q8WV24 401 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-243ENST00000556671 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 FAM167A-AS1Q96KT0 104 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 IGF2BP2-AS1Q96M15 143 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 LINC00477Q96M19 166 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 VGLL1Q99990 258 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 NIPSNAP3BQ9BS92 247 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 Q9H3A6 140 aa3.34□□□□□ -1.87
ATXN3-243ENST00000556671 TENM2Q9NT68 2774 aa3.34□□□□□ -1.88
ATXN3-243ENST00000556671 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 RAB19A4D1S5 217 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 G3V3Q6 166 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 K7EQM0 130 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 LY6G6CO95867 125 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 CXorf1O96002 111 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 NMBP08949 121 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 SPART-AS1P0CW21 52 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 AZU1P20160 251 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 GCHFRP30047 84 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 DAD1P61803 113 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 GNG5P63218 68 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-243ENST00000556671 PNRC1Q12796 327 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-243ENST00000556671 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 CEMP1Q6PRD7 247 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-243ENST00000556671 AMTNQ6UX39 209 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 STOML3Q8TAV4 291 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 RXFP4Q8TDU9 374 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
ATXN3-243ENST00000556671 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms